G452458


Basic Information

Item Value
gene id G452458
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5152726 ~ 5153054 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519487
ATTTATATAAAAAGAACTGGCAAAAGACATTTTTGGGTTAAAAATCGAATCGTTGTAAAAAAGCCATAGGGGTTGAAATATCACATCTTACATAAATTCAATCCAATTAGTTGCACTCCAGGTATTTAAATATCAAGTATTATTCTTAAATAAAAAAAAACAAAAAAAACAACAACAACTATTGATTAAATGGTTAGTTCACCCAAAAATTAAAATTACTCACCCTCATGTCGTTTCACACCCGTAAGACCTTCGTTCATCTTCAGAACACAAATTAAGATATTTTTGATCAAATCGGATGGCTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519487 True 305 lncRNA 0.30 2 5152726 5153054

Neighbor

gene id symbol gene type direction distance location
CI01000319_05112104_05116909 NA coding upstream 35652 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 200376 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 219640 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 237130 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 251826 4869169 ~ 4900900 (+)
CI01000319_05435510_05450379 NA coding downstream 282175 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 465302 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 498060 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 531362 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 551029 5704083 ~ 5713885 (+)
G452427 NA non-coding upstream 93391 5058982 ~ 5059335 (+)
G452390 NA non-coding upstream 207274 4944953 ~ 4945452 (+)
G452351 NA non-coding upstream 374582 4777910 ~ 4778144 (+)
G452261 NA non-coding upstream 391402 4665120 ~ 4761324 (+)
G452274 NA non-coding upstream 551185 4595669 ~ 4601541 (+)
G452455 NA non-coding downstream 4326 5157380 ~ 5159750 (+)
G452504 NA non-coding downstream 11125 5164179 ~ 5168282 (+)
G452518 NA non-coding downstream 58714 5211768 ~ 5211981 (+)
G452574 NA non-coding downstream 141264 5294318 ~ 5294529 (+)
G452590 NA non-coding downstream 166991 5320045 ~ 5321004 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 362197 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 616701 4515268 ~ 4536025 (+)
G452043 NA other upstream 1608007 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1732126 3402112 ~ 3448275 (+)
G451662 NA other upstream 1817902 3333281 ~ 3334824 (+)
G452541 NA other downstream 186468 5336085 ~ 5353023 (+)
G452545 NA other downstream 200640 5353694 ~ 5356035 (+)
G452543 NA other downstream 206646 5359700 ~ 5371484 (+)
G452735 NA other downstream 555108 5712686 ~ 5712732 (+)
G452884 NA other downstream 969590 6122644 ~ 6124939 (+)

Expression


Co-expression Network