G452504


Basic Information

Item Value
gene id G452504
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5164179 ~ 5168282 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519535
TGGTGAAGTTAAAAAGCGGAGGCAGCTCTCGACCGCTGGGCAGACGGGTGCCAGGTTGGCGCAGCTCGTCAAAGAAGCCGTGAGCGCAAGCCTGAAGCGGCGACAGTCGTGTCACTGGTGTGTACTCTAAGAGCCGAGAGCACAGGGCTATTGCCTCAGGAGGAGTTCTTGGTTTAAACACCTTGGTCCATGGATGTGCTTTGATCTGTGGGAATTTGAACTCTGTGTAGTTCGGGTTCATTTCACGGATCTGATCTCTTGTGGGTGTTCCAAGTACCTTTATGATCTCCACTAGCTGGTCCACACCACTGTCTCCAGGGAAGATGGGCTGCCCCAGCAGCAGTTCGGCCAGCACACATCCAGCTGACCAGACGTCAATGTTGGAGGTGTAGTCTGTCGCACCAAAGATGAGTTCAGGGGCGCGGTAGTATCGTGAGCAGATATAAGAGACATTAGGCTCACCCCTCACCAGCTGCTTTGCACTGAGACAGATTTGAATTATGAGAAAAACTTTAATCAGGCAGTCAGTATGAAAACGACAGATTTATTATTCTTCAATAAAACAAACACTGAATCAAGCTCAACACCACAAAATAGCCAAAAATCTTCCTCCATCCTGGTACAAAAAAAGTGCACTGTTGTTTAAACGTTTCTGTATTAAACGCTTTGTAATTTTTTTTAAATAAGGCATGACAGAACAGCTGGGAAAACAGCTCCAGAATAATGCTCAATTCAATACAGATGCACTTTCAAACAAAGCAATTATTCCAGTCTGATGTGTATCTCCGCTCTGCCAAATAACTATTTTCAAGCTTTTTCAGTTGCCAAATTGTACACTTTTTTCCAGACACTAAAGCCAGTGTTTATGTTCCCTCAAAAGAAATCGACCTGAATGCCAACAAGTGCCTTACACAATCAAAAATTAAATACTTGAAATTGCAATAGATTAAACAAATGTGGTCTGGATTACAGTGGTCAACATTTCTGCCAATCATCCAATAGTTCAAGTGTTTCTCATAGAACAGCTCTGAAAAACAGACTGTTTTTAATGGGAATCCATCGAAAAAGGGGGCCAAAGTTTGGCCTGCAGGACAAAGGAATATCCATCAATATCTGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519535 True 1117 lncRNA 0.44 3 5164179 5168282

Neighbor

gene id symbol gene type direction distance location
CI01000319_05112104_05116909 NA coding upstream 47105 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 211829 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 231093 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 248583 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 263279 4869169 ~ 4900900 (+)
CI01000319_05435510_05450379 NA coding downstream 266947 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 450074 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 482832 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 516134 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 535801 5704083 ~ 5713885 (+)
G452455 NA non-coding upstream 4429 5157380 ~ 5159750 (+)
G452458 NA non-coding upstream 11125 5152726 ~ 5153054 (+)
G452427 NA non-coding upstream 104844 5058982 ~ 5059335 (+)
G452390 NA non-coding upstream 218727 4944953 ~ 4945452 (+)
G452351 NA non-coding upstream 386035 4777910 ~ 4778144 (+)
G452518 NA non-coding downstream 43486 5211768 ~ 5211981 (+)
G452574 NA non-coding downstream 126036 5294318 ~ 5294529 (+)
G452590 NA non-coding downstream 151763 5320045 ~ 5321004 (+)
G452541 NA non-coding downstream 167803 5336085 ~ 5353023 (+)
G452597 NA non-coding downstream 187806 5356088 ~ 5427852 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 373650 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 628154 4515268 ~ 4536025 (+)
G452043 NA other upstream 1619460 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1743579 3402112 ~ 3448275 (+)
G451662 NA other upstream 1829355 3333281 ~ 3334824 (+)
G452545 NA other downstream 185412 5353694 ~ 5356035 (+)
G452543 NA other downstream 191418 5359700 ~ 5371484 (+)
G452735 NA other downstream 539880 5712686 ~ 5712732 (+)
G452884 NA other downstream 954362 6122644 ~ 6124939 (+)

Expression


Co-expression Network