G452574


Basic Information

Item Value
gene id G452574
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5294318 ~ 5294529 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519625
TTATATCCGATACAGTACCTCTTTCGCGCACCACATATTTCTGGGCCGATCGATACCTCTGACTCCCTACAAGACAATAATCGCTCCTCTCCCCCCCTCCCCTGTATGGCTACCATTATTACCACCCTCCCCGGGGGAACGCACAAAACAGGGAGGGAGGCCGACGCTTCTACCCTTCCTCCATCCCTCTGTCCGTCCACCCCGACCCTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519625 True 212 lncRNA 0.57 1 5294318 5294529

Neighbor

gene id symbol gene type direction distance location
CI01000319_05112104_05116909 NA coding upstream 177244 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 341968 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 361232 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 378722 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 393418 4869169 ~ 4900900 (+)
CI01000319_05435510_05450379 NA coding downstream 140700 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 323827 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 356585 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 389887 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 409554 5704083 ~ 5713885 (+)
G452518 NA non-coding upstream 82337 5211768 ~ 5211981 (+)
G452504 NA non-coding upstream 126036 5164179 ~ 5168282 (+)
G452455 NA non-coding upstream 134568 5157380 ~ 5159750 (+)
G452458 NA non-coding upstream 141264 5152726 ~ 5153054 (+)
G452427 NA non-coding upstream 234983 5058982 ~ 5059335 (+)
G452590 NA non-coding downstream 25516 5320045 ~ 5321004 (+)
G452541 NA non-coding downstream 41556 5336085 ~ 5353023 (+)
G452597 NA non-coding downstream 61559 5356088 ~ 5427852 (+)
G452658 NA non-coding downstream 163802 5458331 ~ 5459625 (+)
G452547 NA non-coding downstream 205254 5499783 ~ 5503223 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 503789 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 758293 4515268 ~ 4536025 (+)
G452043 NA other upstream 1749599 3500279 ~ 3500512 (+)
CI01000319_03402932_03447997 BTR26, BTR25, BTR24, BTY, BTR22, BTR18 other upstream 1873718 3402112 ~ 3448275 (+)
G451662 NA other upstream 1959494 3333281 ~ 3334824 (+)
G452545 NA other downstream 59165 5353694 ~ 5356035 (+)
G452543 NA other downstream 65171 5359700 ~ 5371484 (+)
G452735 NA other downstream 413633 5712686 ~ 5712732 (+)
G452884 NA other downstream 828115 6122644 ~ 6124939 (+)

Expression


Co-expression Network