G452597


Basic Information

Item Value
gene id G452597
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5356088 ~ 5427852 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519649
CAGCTTTTTGTTTTGAAGAAACACGCCCAAGACCAATGGAACCGTGCTCTGGCCCACCTCTTGCAAGCGGGCTAGGGGCAGTTAAATGAACTGCCTGGGTGCGGTACAGAGCGATCACACTAGTCAAACGAACACCGCAGTACAATTAAAGTGTGTGAGTAAAGTGGAGGCGGAGCTTGAGAAGGAATTTTTTAAATATATTAATGTTCGTTGCTGATGAATTTTGATATAAAATATTTAAGTCCATGTTTGATAATCATAGACCTTAAAGGGTTAGTTCACCCAAAAATGAAAATTCTATCATTAATTACTCACCCTCATGTCGTTCCAAACCCGTAAGACCTTCGTTCATCTTCGGAACACAAATTAAGATATTTTTGTTGAAATCCGATGGCTCAGTGAGGCCACTGCTTCATGAAGCTTTGGAGTGTTATGAATCTTTTGTGTCGAATCAGCGGTTCGGAGCGCCAAAGTCACGTGATTTCAGCAGTTTGGCGGTTTGACAGAATTTTCATTTTTGGGTGAACTAACCCTTTAATCATCTTGTGGCTTTATTTATTAATCATGGTGAGGCAAGAGTTCATTTTAAAAAATGGTACGCTCCAATTAGTTAGCGGGAAAATGTGACTCACTAGTAGAAGGGAGGATTGGAAGACGGATTATGATTTGAGTGAATTTGAACAATTCAGTGCTGCTTGAGTGCACTGAAACTCTGGCCTCAATAGTTGAGTTGGTACTGTTTTAGTACCTAACAGTTCTAGTTTTTAGACTTTTTATTTCAGCTCTTAACCATATTTATTTGCACATTTTGCACATCTGCTTTAATAAACATCTTTTTGGGCGGCAACATCACTCCCATGTTTACATCTTGGTGTGATTCTCCTTGTGACCGCTCGGGTCTCTATACACACACGCACGGACACACACTAGTGCTGGTGTTCTTGAGTGTAGCTGGCGATTGAAGCATCACATCAGATCATGTAACACAAACGAC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519649 True 994 lncRNA 0.41 3 5356088 5427852

Neighbor

gene id symbol gene type direction distance location
CI01000319_05112104_05116909 NA coding upstream 239014 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 403738 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 423002 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 440492 4907006 ~ 4915596 (+)
CI01000319_04869169_04900787 PLAK, JUPB coding upstream 455188 4869169 ~ 4900900 (+)
CI01000319_05435510_05450379 NA coding downstream 7377 5435229 ~ 5450632 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 190504 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 223262 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 256564 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 276231 5704083 ~ 5713885 (+)
G452541 NA non-coding upstream 3065 5336085 ~ 5353023 (+)
G452590 NA non-coding upstream 35084 5320045 ~ 5321004 (+)
G452574 NA non-coding upstream 61559 5294318 ~ 5294529 (+)
G452518 NA non-coding upstream 144107 5211768 ~ 5211981 (+)
G452504 NA non-coding upstream 187806 5164179 ~ 5168282 (+)
G452658 NA non-coding downstream 30479 5458331 ~ 5459625 (+)
G452547 NA non-coding downstream 71931 5499783 ~ 5503223 (+)
G452681 NA non-coding downstream 78676 5506528 ~ 5507227 (+)
G452685 NA non-coding downstream 84941 5512793 ~ 5513079 (+)
G452693 NA non-coding downstream 97580 5525432 ~ 5525655 (+)
G452545 NA other upstream 53 5353694 ~ 5356035 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 565559 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 820063 4515268 ~ 4536025 (+)
G452043 NA other upstream 1811369 3500279 ~ 3500512 (+)
G452735 NA other downstream 280310 5712686 ~ 5712732 (+)
G452884 NA other downstream 694792 6122644 ~ 6124939 (+)

Expression


Co-expression Network