G452547


Basic Information

Item Value
gene id G452547
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5499783 ~ 5503223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519593
ACCAGCTTCAAGTCGAAGGATTTTGGCTCGCTCTGCGTCCTCTGGGTTACCAGGCAGGTGATTTCTTTTCCGTTTTCAGCAGGTGTCGGGATCATCCGATACTCGCTCTTTACGGTCACTGTGCCGTCCACTTCGGGCACTGAAGTGTGGTTATAGCGGCCAGCAACAGTTGTAATCCAGGAGATTGTTGCCTCTGGTTTTCCTTGGGCTGCTTCACAACTTGCCACGACAACTTCAGAAGGGCCGGCTTGGACTGGGATGGCGGTAGCTGAGTTTTTGGGTTTAGCCAGCATGATAAGAGTGGTCGTTCCTTGCTCGTTTCCACTGGGGTAAGTTGCGTACTCGCAGATGTACCTGCCAGCATCAGCCATCTTCAGTTTGTCGATCCTAATGGATGGGTTCTCCAGGGAGCCCCTTGTGAAATTAACTCTGCCTTCAAACTCTTTATTAGGGAAACTGGCTCCATATGAGGGATGGAATACAGCAATGTTGTGCCTATCACCCTCAACACGCTCAAACATCCACGAAACCTACGAACCAGAAGAAATAGGGAATTAATTCTTGCACGGCATTGCTTTAACATACTGCATGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519593 True 594 lncRNA 0.50 2 5499783 5503223

Neighbor

gene id symbol gene type direction distance location
CI01000319_05435510_05450379 NA coding upstream 49151 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 382709 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 547433 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 566697 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 584187 4907006 ~ 4915596 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 115133 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 147891 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 181193 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 200860 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 215109 5718332 ~ 5734843 (+)
G452658 NA non-coding upstream 40158 5458331 ~ 5459625 (+)
G452597 NA non-coding upstream 71931 5356088 ~ 5427852 (+)
G452541 NA non-coding upstream 146760 5336085 ~ 5353023 (+)
G452590 NA non-coding upstream 178779 5320045 ~ 5321004 (+)
G452574 NA non-coding upstream 205254 5294318 ~ 5294529 (+)
G452681 NA non-coding downstream 3305 5506528 ~ 5507227 (+)
G452685 NA non-coding downstream 9570 5512793 ~ 5513079 (+)
G452693 NA non-coding downstream 22209 5525432 ~ 5525655 (+)
G452694 NA non-coding downstream 22449 5525672 ~ 5525941 (+)
G452695 NA non-coding downstream 22782 5526005 ~ 5526215 (+)
G452543 NA other upstream 128299 5359700 ~ 5371484 (+)
G452545 NA other upstream 143748 5353694 ~ 5356035 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 709254 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 963758 4515268 ~ 4536025 (+)
G452735 NA other downstream 204939 5712686 ~ 5712732 (+)
G452884 NA other downstream 619421 6122644 ~ 6124939 (+)

Expression


Co-expression Network