G452685


Basic Information

Item Value
gene id G452685
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5512793 ~ 5513079 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519747
ATATATCATTACCACACTGGATATAGTGATTTGTGAAAATCTACCAACCATGAAAGTGTGTTTGCATTATTGTTAAAAAATAATTAAATTAATAAATAAATATATCCAATCACATTGGTAGATGTGGCAAAACTTTTCATTTTGTTTAATTGCGGATGCTTCACCAACTTAGCTTATTTCTTGTTTTGCTAACTTATTTCTATTACACACCATTTTCCTGGAAGAGAAAGACATTTTAAACATATTAAATGCAAATTTAGTCCCCTTTTAGGATAATACTAGCATAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519747 True 287 lncRNA 0.28 1 5512793 5513079

Neighbor

gene id symbol gene type direction distance location
CI01000319_05435510_05450379 NA coding upstream 62161 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 395719 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 560443 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 579707 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 597197 4907006 ~ 4915596 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 105277 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 138035 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 171337 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 191004 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 205253 5718332 ~ 5734843 (+)
G452681 NA non-coding upstream 5566 5506528 ~ 5507227 (+)
G452547 NA non-coding upstream 9570 5499783 ~ 5503223 (+)
G452658 NA non-coding upstream 53168 5458331 ~ 5459625 (+)
G452597 NA non-coding upstream 84941 5356088 ~ 5427852 (+)
G452541 NA non-coding upstream 159770 5336085 ~ 5353023 (+)
G452693 NA non-coding downstream 12353 5525432 ~ 5525655 (+)
G452694 NA non-coding downstream 12593 5525672 ~ 5525941 (+)
G452695 NA non-coding downstream 12926 5526005 ~ 5526215 (+)
G452696 NA non-coding downstream 14217 5527296 ~ 5527521 (+)
G452697 NA non-coding downstream 14601 5527680 ~ 5527890 (+)
G452543 NA other upstream 141309 5359700 ~ 5371484 (+)
G452545 NA other upstream 156758 5353694 ~ 5356035 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 722264 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 976768 4515268 ~ 4536025 (+)
G452735 NA other downstream 195083 5712686 ~ 5712732 (+)
G452884 NA other downstream 609565 6122644 ~ 6124939 (+)

Expression


Co-expression Network