G452697


Basic Information

Item Value
gene id G452697
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5527680 ~ 5527890 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519759
AATCTGCTGTGAGAAGTAATAACACAAGTTGTAAGATCTACTGATCTGTGCAGTCGCCGGCAGTTTTTGATATTCCTTGTAAACCACTTAAACTGGCCCACCATGGAACAAAGCGGTCCGCAGCAGCTACGTTACGGTTACACACCGAGACATAGCTGTCTGCAATAAGCCTCGAGGTCAGCTGTGAAGGGCAACTAGAAGAGTCTAGAAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519759 True 211 lncRNA 0.47 1 5527680 5527890

Neighbor

gene id symbol gene type direction distance location
CI01000319_05435510_05450379 NA coding upstream 77048 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 410606 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 575330 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 594594 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 612084 4907006 ~ 4915596 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 90466 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 123224 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 156526 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 176193 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 190442 5718332 ~ 5734843 (+)
G452696 NA non-coding upstream 159 5527296 ~ 5527521 (+)
G452695 NA non-coding upstream 1465 5526005 ~ 5526215 (+)
G452694 NA non-coding upstream 1739 5525672 ~ 5525941 (+)
G452693 NA non-coding upstream 2025 5525432 ~ 5525655 (+)
G452685 NA non-coding upstream 14601 5512793 ~ 5513079 (+)
G452698 NA non-coding downstream 122 5528012 ~ 5529374 (+)
G452701 NA non-coding downstream 3964 5531854 ~ 5532071 (+)
G452702 NA non-coding downstream 4245 5532135 ~ 5532581 (+)
G452703 NA non-coding downstream 6868 5534758 ~ 5535031 (+)
G452706 NA non-coding downstream 9614 5537504 ~ 5537740 (+)
G452543 NA other upstream 156196 5359700 ~ 5371484 (+)
G452545 NA other upstream 171645 5353694 ~ 5356035 (+)
G452541 NA other upstream 180686 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 737151 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 991655 4515268 ~ 4536025 (+)
G452735 NA other downstream 180272 5712686 ~ 5712732 (+)
G452884 NA other downstream 594754 6122644 ~ 6124939 (+)

Expression


Co-expression Network