G452805


Basic Information

Item Value
gene id G452805
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5586786 ~ 5588895 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519880
CCACAGAAATTCTATTCTTATAGACAGATATACATATACACAGGGTTAGTCGAGATCAGAATTAAAACTTATGTTAATAACAGGCCACATTACAATAAACAACTGACAATCGTGTGTGCGTACATAGAAATGTTTGCACTTCACTTCGCTTCTGGAGTGATTTCAGATTTAGCTGTTATTAAATGTTCTGAAATTAATGCTTATGAAACTCTTGAATAAGACAGCACATCTTCATAACTGCATGTGTATATTCTCATCGCCCATTTAAAACCTCCCATACAGTATTTAATGATAACATATTATAATACCAGCCATTATGTTGGTAACAACTTGTATCTAGTTAACAAAGCCTATCCAAGTCTAATTCAGTATTTGAATCCAAAGACTCAGTCTCTTAAATTCATAAACCCATACTTCTGAAAATATAAAATCCCACAAAAAACACATTTATATTCATACATATTTGATTTTTAGCTTTTAGAAGATTACATCCTTGTGTATACTGAATACATATATCATAAACTGTTAGAAGGCATCCAGTGTTGAGTTCTAATGGGATGCAGTGCGTACTGAAGCTGGTGTGCAAATCCAACACCCTCATATGATCCAAATCAGTTTAAATCACCATTCAAAGCAATTAGCACCACGGCAGAAAACATTAACTCGCCATCATTTGCATGGTGAATGCCAAGAAGCAACATATCTGCCAGTCCCAATGAATTTGATTGTAATAACAACATGTCTGAAAGCATTTGGTTTATTACAGAGGCTTAAATGAGAGGAAGCATTGATTGATTCCTGGACTCAGCGGTTTCTGGCTCGGTGGCAGCCGCAGTGGAAGTCTGCATTGGGGTCGAACAGCAGCGAGTCTCGGTTGTGGTTGTGCGGCAGGCAGTCGAGGTGATACCAGGCGTCGCAGTCGTCACACTGGATCCACTGCACGGTGTCCTGCTGCGGGAGACGACAGTGTGCCGCTGCGCAAGGTTCCACGCCCTGCGCGACCCCCACGTCAACATCGTCATCATCTTCAGAGGATGAAGAAGAAGATGATGAGGAAGAGGAGGAGCTGGAGGAAGATGATGATGAGGGAGAAGGCAGGGAAGGCCGTGGCAGCGGGTGTTTTCTAGGCCTTCCACGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519880 True 1138 lncRNA 0.42 2 5586786 5588895

Neighbor

gene id symbol gene type direction distance location
CI01000319_05435510_05450379 NA coding upstream 136154 5435229 ~ 5450632 (+)
CI01000319_05112104_05116909 NA coding upstream 469712 5111633 ~ 5117074 (+)
CI01000319_04949418_04952350 PDK2B coding upstream 634436 4949305 ~ 4952350 (+)
CI01000319_04931863_04933044 NA coding upstream 653700 4931653 ~ 4933086 (+)
CI01000319_04907275_04915465 WIPF2B coding upstream 671190 4907006 ~ 4915596 (+)
CI01000319_05618356_05625888 FLOT1, FLOT1A coding downstream 29461 5618356 ~ 5626767 (+)
CI01000319_05651284_05669061 KIFC1, ZBTB22B coding downstream 62219 5651114 ~ 5671460 (+)
CI01000319_05684798_05685353 NA coding downstream 95521 5684416 ~ 5685353 (+)
CI01000319_05704764_05712826 NA coding downstream 115188 5704083 ~ 5713885 (+)
CI01000319_05718732_05734284 NA coding downstream 129437 5718332 ~ 5734843 (+)
G452804 NA non-coding upstream 4225 5582351 ~ 5582561 (+)
G452690 NA non-coding upstream 24742 5561770 ~ 5562044 (+)
G452712 NA non-coding upstream 45112 5541467 ~ 5541674 (+)
G452711 NA non-coding upstream 45951 5540455 ~ 5540835 (+)
G452710 NA non-coding upstream 46544 5540023 ~ 5540242 (+)
G452705 NA non-coding downstream 4509 5593404 ~ 5654938 (+)
G452769 NA non-coding downstream 86533 5675428 ~ 5678025 (+)
G452735 NA non-coding downstream 121998 5712686 ~ 5712732 (+)
G452820 NA non-coding downstream 150198 5739093 ~ 5739474 (+)
CI01000319_05796587_05803719 ABCB3L2 non-coding downstream 157909 5793688 ~ 5804150 (+)
G452543 NA other upstream 215302 5359700 ~ 5371484 (+)
G452545 NA other upstream 230751 5353694 ~ 5356035 (+)
G452541 NA other upstream 239792 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 796257 4787040 ~ 4790529 (+)
CI01000319_04515268_04534770 NA other upstream 1050761 4515268 ~ 4536025 (+)
G452884 NA other downstream 533749 6122644 ~ 6124939 (+)

Expression


Co-expression Network