G452825


Basic Information

Item Value
gene id G452825
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 5854955 ~ 5855198 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519905
ATTTGTCTTACACAAACGCATCGATTCTCTTCAGAAGGCCTTTATTAACCCCCTGGAGTCATATGGATTACTTTTTTTATGGATGAATGCATTTTTTTTGTCTTCAAAATGTGGCCACCCATTCACAACCATTATAAACCTTGGAGGACTAAGGAAATTTTTTCAAATATATCTCTGATTGTGTTCATCTAAAAGAAGATTGTCATATACACAGGGTCGGCGAGTGCCTATAGGCAAACTAGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519905 True 244 lncRNA 0.37 1 5854955 5855198

Neighbor

gene id symbol gene type direction distance location
CI01000319_05828294_05834113 NA coding upstream 19870 5828007 ~ 5835085 (+)
CI01000319_05816948_05819499 PSMB8F coding upstream 35456 5816825 ~ 5819499 (+)
CI01000319_05812788_05816097 NA coding upstream 38784 5812693 ~ 5816171 (+)
CI01000319_05796587_05803719 ABCB3L2 coding upstream 50805 5793688 ~ 5804150 (+)
CI01000319_05742834_05745945 NA coding upstream 108814 5741331 ~ 5746141 (+)
CI01000319_05872448_05880610 BRD2A, BRD2 coding downstream 16752 5871950 ~ 5880610 (+)
CI01000319_05882023_05885700 NA coding downstream 26825 5882023 ~ 5885805 (+)
CI01000319_05887712_05890105 HSD17B8 coding downstream 32320 5887518 ~ 5890794 (+)
CI01000319_05974099_05976045 CCDC127B coding downstream 118901 5974099 ~ 5976055 (+)
CI01000319_05978795_05979500 NA coding downstream 122997 5978195 ~ 5979549 (+)
G452748 NA non-coding upstream 101996 5751718 ~ 5752959 (+)
G452821 NA non-coding upstream 104498 5749840 ~ 5750457 (+)
G452820 NA non-coding upstream 115481 5739093 ~ 5739474 (+)
G452735 NA non-coding upstream 122019 5712686 ~ 5712732 (+)
G452826 NA non-coding downstream 1207 5856405 ~ 5856609 (+)
G452798 NA non-coding downstream 92343 5947541 ~ 5951211 (+)
G452784 NA non-coding downstream 111692 5966890 ~ 5967329 (+)
G452856 NA non-coding downstream 130510 5985708 ~ 5986065 (+)
G452880 NA non-coding downstream 196169 6051367 ~ 6051568 (+)
G452543 NA other upstream 483471 5359700 ~ 5371484 (+)
G452545 NA other upstream 498920 5353694 ~ 5356035 (+)
G452541 NA other upstream 507961 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 1064426 4787040 ~ 4790529 (+)
G452884 NA other downstream 267446 6122644 ~ 6124939 (+)

Expression


Co-expression Network