G452884


Basic Information

Item Value
gene id G452884
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000319
NCBI id null
chromosome length 6428943
location 6122644 ~ 6124939 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU519967
TTTGGGTGAACTAACCTTTTAAACCTGATCAGCAAGTGTTTTAGGCGAAACGGAGGGGATAAATTAAAAACCTTCTGCCCAGCCTGTGGGCAGGGATACAAAAATGTGGAAGTAGAATCTGCAGTTTTCACAAAAGCCCTGGAAGCTGTCAAAGGTCCACCTAATGGCACGTTTTGCGTCATCCGGAGGACTTTAGCTGACAAATAAACAGGAATTTCTCGGTCCAATGCAAAACATCTTCATGTTGACCCCACATACCCCTGCCGTATCCTTGCGTGTGTTTGGCAAAGCTCCTGACCACGGCGTCCACCGCCTCCCTCAGAACCGCTGGGTTGGTGGGATTGGACAGACCCAGACCTGCCGCCGCCATGTCCACCGACCCAAACCCGCTGCCCATGATACCGGACCCGAGGCTGTGGAGCTGAAGGGGCGGCAGTGGTGGCGGCGGCCCCGGGGAAGCAGACACCGAGATGTGGGAACCCTGTGCCGAGGAAAGAGTGCCGGTTACACCGGGCCGCAGGGACCGAAGCGTCCCGGTCGCGCTCGCTCCGTATCCGATACCGGGCTGTAAGCGCTGATGGCGAAGAGACTCCATTGTCTCGAAAAGTGATGCAAAAGAAAACAATACAAAGGGAACGACTACTACAAACGATTACAAAGCCGATTAAAAATGCATATGGCAGTCATAAAAAGTGTTTCTCGAAGGTATGCGCTTTTGTTAGGCTGATTGGGCAAAATATTATTTACTGTTTGGGGCGTTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU519967 True 764 TUCP 0.52 2 6122644 6124939

Neighbor

gene id symbol gene type direction distance location
CI01000319_06103395_06107623 NA coding upstream 14162 6103260 ~ 6108482 (+)
CI01000319_06100790_06101982 MRPL24 coding upstream 20566 6100206 ~ 6102078 (+)
CI01000319_06070748_06083546 FAM63A coding upstream 38880 6068131 ~ 6083764 (+)
CI01000319_06054270_06057766 SF3B4 coding upstream 64745 6053847 ~ 6057899 (+)
CI01000319_06044073_06049600 NA coding upstream 72683 6044073 ~ 6049961 (+)
CI01000319_06133262_06139477 PBXIP1A coding downstream 8323 6133262 ~ 6140633 (+)
CI01000319_06142385_06143926 S100A11, S10AB coding downstream 17446 6142385 ~ 6144063 (+)
CI01000319_06150880_06153732 NA coding downstream 25941 6150880 ~ 6154429 (+)
CI01000319_06156655_06161968 S100T, S100S coding downstream 31716 6156655 ~ 6162746 (+)
CI01000319_06175244_06178365 NA coding downstream 50305 6175244 ~ 6178461 (+)
G452782 NA non-coding upstream 4459 6116267 ~ 6118185 (+)
G452792 NA non-coding upstream 6555 6114501 ~ 6116089 (+)
G452768 NA non-coding upstream 34021 6085839 ~ 6088623 (+)
G452881 NA non-coding upstream 58272 6063018 ~ 6064372 (+)
G452760 NA non-coding upstream 62139 6058549 ~ 6060505 (+)
G452895 NA non-coding downstream 104677 6229616 ~ 6229948 (+)
CI01000319_06316911_06319511 CKS1B.L, BRAFLDRAFT_59154, CKS1, CKS1B, CKS1B.S, CKS2 non-coding downstream 191669 6316836 ~ 6319569 (+)
CI01000319_06321729_06328918 NA non-coding downstream 197207 6321729 ~ 6329654 (+)
CI01000319_06373867_06384385 NA non-coding downstream 249881 6373484 ~ 6384471 (+)
G453830 NA non-coding downstream 263489 6388428 ~ 6388654 (+)
G452735 NA other upstream 389708 5712686 ~ 5712732 (+)
G452543 NA other upstream 751160 5359700 ~ 5371484 (+)
G452545 NA other upstream 766609 5353694 ~ 5356035 (+)
G452541 NA other upstream 775650 5336085 ~ 5353023 (+)
CI01000319_04787066_04788609 EIF1B, EIF1, GM6900 other upstream 1332115 4787040 ~ 4790529 (+)

Expression


Co-expression Network