XLOC_013088 (fli1a)


Basic Information

Item Value
gene id XLOC_013088
gene name fli1a
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 48423973 ~ 48487875 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00025996
TTTAGTTTCCTCTAAATTGACCTGTAGATTTGTGTTTTTTCAAGGGGCCGTGAAGTGAACATCATACATTTCCGGACTCTCTGTCCAATGACAATGTTTCAGACCGTCCCCGACACTTCGTCTTACGTCAAGgaggCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCATACGCCGCTGCTGCTCCTTTACCCAAGACAGACATGACTGCGTCCGGGACTCAGGATTACGGCCAGACGCACAAAATCAACCCCATTCCCCCTCAGCAAGAGTGGATTAATCAGCCGGTGCGGGTGAACGTCAAGCGAGAGTATGACCACATCAATGGATCCAGAGAGTCGCCGGTGGACTGCAGCGTGGGGAAATGCAATAAAATGGTGGGCGGGACCGAAGCGTCTCAGATGAACTATACTGGCTACATGGATGAGAAATGTGCTCCGCCTCCAAACATGACGACCAATGAGAGGAGAGTCATCGTCCCCGCAGACCCGTCTCTGTGGTCTCCGGATCACGTGCGGCAGTGGTTAGACTGGGCCATTAAGGAGTACGGTCTTCAGGAGATCGACACGGCCATGTTTCACAGCACAGATGGAAAAGAGCTCTGCAAGATGAGCAAAGACGACTTCCTGAGACTCACCAGCGTTTATAACACCGAGGTCCTGCTCTCACATCTCAATTACCTCAGGGAAAGTAGCTCATCGATATCATACAACACGCCATCTCACGCTGACCAGTCCCCTCGCCTGGCTGCAAAAGACGATGCGTCTTATGATGCTGTACGGAGGACGGGCTGGTCGAACAACATGCACAGCGGAAAAGGCTCTCCAACAGTGGTCTCTCAGAGCGTGTCCAAAAACCCGGATCAGCCTCGTCCTCAGCCAGATCCTTATCAGATATTAGGACCCACCAGCAGTCGACTTGCTAACCCAGgctCAGGTCAGATCCAGCTGTGGCAGTTCCTGCTGGAGCTCCTCTCCGACAGCGCCAACGCTGGCTGCATCACCTGGGAAGGAACCAACGGAGAGTTCAAGATGACGGACCCAGACGAGGTGGCACGGCGCTGGGGCGAACGCAAGAGCAAACCCAACATGAACTACGACAAGCTGAGCCGAGCCCTGCGCTACTACTACGACAAGAACATCATGACCAAAGTGCACGGCAAGCGCTACGCCTACAAGTTCGACTTCCACGGCATCGCCCAGGCCCTGCAACCCCATCCCACCGAGTCCACCATGTACAAGTACCCGAGCGAGCTGCCGTACGTGCCTAGCTATCACGCCCACCAGCAGAAGGTCAACTTCGTCTCTCCTCACCCTCCGTCAATGCCCGTCACCTCCTCCAACTTCTTCGGTCCCACAACCCCATACTGGAGCTCCCCACCAGGAGGTATTTACCCCAATCCCAGCGTCCCACGCCATGCCAATTCACACGTGCCTTCACACCTTGGTAGTTACTACTAA
>TCONS_00025997
AGGGGCCGTGAAGTGAACATCATACATTTCCGGACTCTCTGTCCAATGACAATGTTTCAGACCGTCCCCGACACTTCGTCTTACGTCAAGgaggCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCATACGCCGCTGCTGCTCCTTTACCCAAGACAGACATGACTGCGTCCGGGACTCAGGATTACGGCCAGACGCACAAAATCAACCCCATTCCCCCTCAGCAAGAGTGGATTAATCAGCCGGTGCGGGTGAACGTCAAGCGAGAGTATGACCACATCAATGGATCCAGAGAGTCGCCGGTGGACTGCAGCGTGGGGAAATGCAATAAAATGGTGGGCGGGACCGAAGCGTCTCAGATGAACTATACTGGCTACATGGATGAGAAATGTGCTCCGCCTCCAAACATGACGACCAATGAGAGGAGAGTCATCGTCCCCGCAGACCCGTCTCTGTGGTCTCCGGATCACGTGCGGCAGTGGTTAGACTGGGCCATTAAGGAGTACGGTCTTCAGGAGATCGACACGGCCATGTTTCACAGCACAGATGGAAAAGAGCTCTGCAAGATGAGCAAAGACGACTTCCTGAGAC
>TCONS_00025998
TGCATTCAGAGGCGCGCACACGTGTGGAGCAGACAGACTCGACGCAGCGGGCTTTGCTTTTTATTCATGGAAGCCCATTTTAGAAGAAGCTCGGGCAGACTCGTCACATTCTTCACTTCACATAGgaggCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCATACGCCGCTGCTGCTCCTTTACCCAAGACAGACATGACTGCGTCCGGGACTCAGGATTACGGCCAGACGCACAAAATCAACCCCATTCCCCCTCAGCAAGAGTGGATTAATCAGCCGGTGCGGGTGAACGTCAAGCGAGAGTATGACCACATCAATGGATCCAGAGAGTCGCCGGTGGACTGCAGCGTGGGGAAATGCAATAAAATGGTGGGCGGGACCGAAGCGTCTCAGATGAACTATACTGGCTACATGGATGAGAAATGTGCTCCGCCTCCAAACATGACGACCAATGAGAGGAGAGTCATCGTCCCCGCAGACCCGTCTCTGTGGTCTCCGGATCACGTGCGGCAGTGGTTAGACTGGGCCATTAAGGAGTACGGTCTTCAGGAGATCGACACGGCCAT
>TCONS_00025999
CGCAGTGACTTCACTTCCCAAATTTAGAGGAAAAAAAACCATCCGGCGAAACTGTCTCTGTCTCTCCGCCACATATCGGGGGCTGGAATTAATTCAGACGCGTGTCATGTTTGGAATATTGTCGGGCTCCACTGAAAATTGCGCAAAATGGACGGAACTATTAAGgaggCGCTGTCAGTGGTGAGTGAAGACCAGTCTCTGTTCGAGCCTCCATACGCCGCTGCTGCTCCTTTACCCAAGACAGACATGACTGCGTCCGGGACTCAGGATTACGGCCAGACGCACAAAATCAACCCCATTCCCCCTCAGCAAGAGTGGATTAATCAGCCGGTGCGGGTGAACGTCAAGCGAGAGTATGACCACATCAATGGATCCAGAGAGTCGCCGGTGGACTGCAGCGTGGGGAAATGCAATAAAATGGTGGGCGGGACCGAAGCGTCTCAGATGAACTATACTGGCTACATGGATGAGAAATGTGCTCCGCCTCCAAACATGACGACCAATGAGAGGAGAGTCATCGTCCCCGCAGACCCGTCTCTGTGGTCTCCGGATCACGTGCGGCAGTGGTTAGACTGGGCCATTAAGGAGTACGGTCTTCAGGAGATCGACACGGCCATGTTTCACAGCACAGATGGAAAAGAGCTCTGCAAGATGAGCAAAGACGACTTCCTGAGACTCACCAGCGTTTATAACACCGAGGTCCTGCTCTCACATCTCAATTACCTCAGGGAAAGTAGCTCATCGATATCATACAACACGCCATCTCACGCTGACCAGTCCCCTCGCCTGGCTGCAAAAGACGATGCGTCTTATGATGCTGTACGGAGGACGGGCTGGTCGAACAACATGCACAGCGGAAAAGGCTCTCCAACAGTGGTCTCTCAGAGCGTGTCCAAAAACCCGGATCAGCCTCGTCCTCAGCCAGATCCTTATCAGATATTAGGACCCACCAGCAGTCGACTTGCTAACCCAGgctCAGGTCAGATCCAGCTGTGGCAGTTCCTGCTGGAGCTCCTCTCCGACAGCGCCAACGCTGGCTGCATCACCTGGGAAGGAACCAACGGAGAGTTCAAGATGACGGACCCAGACGAGGTGGCACGGCGCTGGGGCGAACGCAAGAGCAAACCCAACATGAACTACGACAAGCTGAGCCGAGCCCTGCGCTACTACTACGACAAGAACATCATGACCAAAGTGCACGGCAAGCGCTACGCCTACAAGTTCGACTTCCACGGCATCGCCCAGGCCCTGCAACCCCATCCCACCGAGTCCACCATGTACAAGTACCCGAGCGAGCTGCCGTACGTGCCTAGCTATCACGCCCACCAGCAGAAGGTCAACTTCGTCTCTCCTCACCCTCCGTCAATGCCCGTCACCTCCTCCAACTTCTTCGGTCCCACAACCCCATACTGGAGCTCCCCACCAGGAGGTATTTACCCCAATCCCAGCGTCCCACGCCATGCCAATTCACACGTGCCTTCACACCTTGGTAGTTACTACTAAACCCTTAAATGCCAAAACTTGAACTGCACTCGAAGATGGAGAAGGGAAGGATTTGGACTGAAAGGATGAGAAGGAGAAAGTCAAAAAAATGGACCACAAACGGTTGATCCTCTTCAAAATGGAGTACTACTTATTCAAGGACTTGGGTTGATGTTTGTTGTGGGGAGTTTGAGCAAGTTTCTTGAGCCTTGAAAGTTGCACCGATAGTTGCGTTCTGCCAAATAAAGACCACCTGTATGATGTGTAAGTCGGCGAAGCGCCGAAAAAATGAATCACTGTAAACTCACCCTGTGTGTTAATGCAATTGTGAACCGAGTGTTTATATTGTCGGACCAAGTCCTTGCTCCCCATCCCTTTGGTTACacaaattcatctttaaaagttGTGACTgagactctttctctctctctatctaaaGCATATCTGGCAACTGGAAAAAAATCTTGGCATTCATTCACCATTTTTTTCCTCCCGAATGGAGGACGTGGCGTCTGATTGTTTATTAGGAGCTTCTCAGGCTACTGGCTCAAGCTAAACTCACGTATTCGTCTTCAGCGCTCTCTTCTGCGTCAGGATGTGAAAGCTTCCAATCATATTTACGTTTCTGATGTCCCATGTGAATCATCTCAAAACAGCCAAAGTTCACGAGTAATTCCTGATCGACTGATTGTGGGCATCATGCAAAGTACCTCTTTAAAAGATTGAAAACAGCAGCACGAGACGATGAAACCAGAGATTCACGAACGCTGTGCGTTTGTCAGACCTATTTgctagtattattttttttttttaatcaaagttcAACTAGGCATTAAAAGCATCTTACTGTATAAATTATGCAGAGCTATTTTCATATGTGACAGTGTTAAAGCATCATACGTTAATACGAGTTGACCTCGGTCAAaatgcaaaccttttttttttttaccagttacTGAAAGTAGTTTGTACTACGTAGGTGTTTTGTATCTGTACATATGGGCAATAAGTTTATgaatgttttcttgtatttttcTTGGCACGTTGCCTTGATAAGAAAGTTGATGATGTGTAGTTGATATTTTTATTCTCTAAACACAAATGCCTTACCAAACATGCTCAGAGACAATCAGTCTCCTGTTAATCAAGTGCCATTATAAGGACGTAAAGCCAAATCGTGTTAGTATGTGCCTCAGACAGTATTATTTTCTTGCATTTTCCCTTGTGTTATTTTCGTAGCATCGAGACAAAACTCCCAGCTGTTCATCTCTTATAAGGGATCACTCTCAGATATGAAGGAATTGTCCTATTTTATATATGCAAGTATTTGGATATTAAATTTatgactatataaatatatatatgaaatattgcaattaatcttttttgttaattttgttgtTTCTGCAATGTATGAAGTATCACCTTTTGTAAAAGGGTTTTTGTATagataaaatgtgaaaaaataaatgtttttacattaaaaaaaaa
>TCONS_00026001
GGCCAGACGCACAAAATCAACCCCATTCCCCCTCAGCAAGAGTGGATTAATCAGCCGGTGCGGGTGAACGTCAAGCGAGAGTATGACCACATCAATGGATCCAGAGAGTCGCCGGTGGACTGCAGCGTGGGGAAATGCAATAAAATGGTGGGCGGGACCGAAGCGTCTCAGATGAACTATACTGGCTACATGGATGAGAAATGTGCTCCGCCTCCAAACATGACGACCAATGAGAGGAGAGTCATCGTCCCCGCAGGTGAATACTGCATAAACCCGTCTCTGTGGTCTCCGGATCACGTGCGGCAGTGGTTAGACTGGGCCATTAAGGAGTACGGTCTTCAGGAGATCGACACGGCCATGTTTCACAGCACAGATGGAAAAGAGCTCTGCAAGATGAGCAAAGACGACTTCCTGAGACTCACCAGCGTTTATAACACCGAGGTCCTGCTCTCACATCTCAATTACCTCAGGGAAAGTAGCTCATCGATATCATACAACACGCCATCTCACGCTGACCAGTCCCCTCGCCTGGCTGCAAAAGACGATGCGTCTTATGATGCTGTACGGAGGACGGGCTGGTCGAACAACATGCACAGCGGAAAAGGCTCTCCAACAGTGGTCTCTCAGAGCGTGTCCAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000054632

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00025996 False 1470 mRNA 0.55 9 48423973 48486405
TCONS_00025997 False 601 mRNA 0.54 4 48424015 48449074
TCONS_00025998 False 577 mRNA 0.55 4 48428126 48449015
TCONS_00025999 False 2973 mRNA 0.46 9 48428713 48487875
TCONS_00026001 True 638 mRNA 0.53 6 48446704 48485286

Neighbor

gene id symbol gene type direction distance location
XLOC_013087 NA coding upstream 219719 48184059 ~ 48204254 (+)
XLOC_013086 smtla coding upstream 245848 48168755 ~ 48178125 (+)
XLOC_013085 CABZ01086755.1 coding upstream 299085 47990791 ~ 48124888 (+)
XLOC_013084 NA coding upstream 547996 47873344 ~ 47875977 (+)
XLOC_013083 NA coding upstream 614242 47769087 ~ 47809731 (+)
XLOC_013090 NA coding downstream 36062 48523937 ~ 48556827 (+)
XLOC_013091 kcnj5 coding downstream 88652 48576527 ~ 48643857 (+)
XLOC_013092 CABZ01102201.1 coding downstream 182866 48670741 ~ 48738174 (+)
XLOC_013093 gemin7 coding downstream 271041 48758916 ~ 48760465 (+)
XLOC_013094 bmp16 coding downstream 305661 48793536 ~ 48812996 (+)
XLOC_013082 NA non-coding upstream 925782 47444191 ~ 47498191 (+)
XLOC_013098 NA non-coding downstream 636890 49124765 ~ 49156952 (+)
XLOC_013099 BX663503.1 non-coding downstream 705949 49193824 ~ 49215023 (+)
XLOC_013102 CABZ01070258.1 non-coding downstream 794188 49282063 ~ 49359785 (+)
XLOC_013103 NA non-coding downstream 868582 49356457 ~ 49357485 (+)

Expression


Co-expression Network