Gene
RNA
| Item | Value |
|---|---|
| gene id | XLOC_013090 |
| gene name | NA |
| gene type | non-coding |
| species | zebrafish (Danio rerio) |
| category of species | model fish |
| Item | Value |
|---|---|
| chromosome id | NC_007129.7 |
| NCBI id | CM002902.2 |
| chromosome length | 51023478 |
| location | 48523937 ~ 48556827 (+) |
| genome version | GRCz11_2017_zebrafish_Genome |
| id | name | namespace |
|---|---|---|
| GO:0048731 | system development | biological_process |
| GO:0007275 | multicellular organism development | biological_process |
| GO:0043062 | extracellular structure organization | biological_process |
| GO:0030198 | extracellular matrix organization | biological_process |
| GO:0048856 | anatomical structure development | biological_process |
| GO:0032501 | multicellular organismal process | biological_process |
| GO:0032502 | developmental process | biological_process |
| GO:0044421 | obsolete extracellular region part | cellular_component |
| GO:0031012 | extracellular matrix | cellular_component |
| GO:0062023 | collagen-containing extracellular matrix | cellular_component |
| GO:0005576 | extracellular region | cellular_component |
| GO:0005577 | fibrinogen complex | cellular_component |
| GO:0005581 | collagen trimer | cellular_component |
| GO:0005615 | extracellular space | cellular_component |
| GO:0005201 | extracellular matrix structural constituent | molecular_function |
| ensembl_id | ENSDARG00000093207 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TCONS_00027184 | False | 32891 | lncRNA | 0.37 | 1 | 48523937 | 48556827 |
| TCONS_00026002 | True | 296 | processed_transcript | 0.41 | 4 | 48541660 | 48553208 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| XLOC_013088 | fli1a | coding | upstream | 36062 | 48423973 ~ 48487875 (+) |
| XLOC_013089 | CR786562.2 | coding | upstream | 85324 | 48438497 ~ 48438613 (+) |
| XLOC_013087 | NA | coding | upstream | 319683 | 48184059 ~ 48204254 (+) |
| XLOC_013086 | smtla | coding | upstream | 345812 | 48168755 ~ 48178125 (+) |
| XLOC_013085 | CABZ01086755.1 | coding | upstream | 399049 | 47990791 ~ 48124888 (+) |
| XLOC_013091 | kcnj5 | coding | downstream | 19700 | 48576527 ~ 48643857 (+) |
| XLOC_013092 | CABZ01102201.1 | coding | downstream | 113914 | 48670741 ~ 48738174 (+) |
| XLOC_013093 | gemin7 | coding | downstream | 202089 | 48758916 ~ 48760465 (+) |
| XLOC_013094 | bmp16 | coding | downstream | 236709 | 48793536 ~ 48812996 (+) |
| XLOC_013095 | ppp1r37 | coding | downstream | 307540 | 48864367 ~ 48936001 (+) |
| XLOC_013084 | NA | non-coding | upstream | 647960 | 47873344 ~ 47875977 (+) |
| XLOC_013083 | NA | non-coding | upstream | 714206 | 47769087 ~ 47809731 (+) |
| XLOC_013098 | NA | non-coding | downstream | 567938 | 49124765 ~ 49156952 (+) |
| XLOC_013099 | BX663503.1 | non-coding | downstream | 636997 | 49193824 ~ 49215023 (+) |
| XLOC_013102 | CABZ01070258.1 | non-coding | downstream | 725236 | 49282063 ~ 49359785 (+) |
| XLOC_013103 | NA | non-coding | downstream | 799630 | 49356457 ~ 49357485 (+) |
| XLOC_013105 | NA | non-coding | downstream | 1349197 | 49906024 ~ 49913858 (+) |
