XLOC_013107


Basic Information

Item Value
gene id XLOC_013107
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 50004734 ~ 50005794 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026943
CAGATGCTGCTTATATTTGTTCGCTTATGATGAAAACTAAGGACAATTTTTGAGCTTTTTTCTCATGGAGAGAGTCCAGGACGATCCATCGGGTGATCAGGGAAGTGTAGAAATCCCTCACAGTCTTTTGTGGATGCTTTTTAACAGggctcaacaataaggactgcccgatggcccggggctagtgtgagagacgcttgggacagtagacgggatcattactggcccgatggGGGCcactttttgttaaataatttcgaacagAAATAAAATACTTACTCATC

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026943 True 284 lncRNA 0.44 2 50004734 50005794

Neighbor

gene id symbol gene type direction distance location
XLOC_013105 NA coding upstream 90876 49906024 ~ 49913858 (+)
XLOC_013104 si:cabz01090165.1 coding upstream 557692 49411417 ~ 49447042 (+)
XLOC_013102 CABZ01070258.1 coding upstream 644949 49282063 ~ 49359785 (+)
XLOC_013103 NA coding upstream 647249 49356457 ~ 49357485 (+)
XLOC_013101 yif1b coding upstream 736878 49248389 ~ 49267856 (+)
XLOC_013108 NA coding downstream 38522 50044316 ~ 50046147 (+)
XLOC_013109 scamp5b coding downstream 83206 50089000 ~ 50100149 (+)
XLOC_013110 NA coding downstream 121695 50127489 ~ 50127777 (+)
XLOC_013111 insyn1 coding downstream 270139 50275933 ~ 50356788 (+)
XLOC_013112 CU896640.1 coding downstream 456187 50461981 ~ 50463268 (+)
XLOC_013099 BX663503.1 non-coding upstream 789711 49193824 ~ 49215023 (+)
XLOC_013098 NA non-coding upstream 847782 49124765 ~ 49156952 (+)
XLOC_013113 NA non-coding downstream 483484 50489278 ~ 50490440 (+)
XLOC_013115 NA non-coding downstream 530259 50536053 ~ 50539640 (+)
XLOC_013116 NA non-coding downstream 615040 50620834 ~ 50622195 (+)

Expression


Co-expression Network