XLOC_013108


Basic Information

Item Value
gene id XLOC_013108
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 50044316 ~ 50046147 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00027195
CTCACCGTTGCCATGTCGATAGAGGCCGTGGCTTCGTCCATGATGAGGATGCTGCTCTTCCTCACGAAGGCCCGAGCGAGACAGAAGAGCTGCCGCTGACCCTGACTGAAGTTCTCTCCTCCTTCAGTCACcactgcatctgtgtgtgtgagataaaAACATTCAGGATGATGGAGAACTTTGATCGGAGCGTCTGCAGCGGAAGCTTTGAG

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00027195 True 212 lncRNA 0.54 2 50044316 50046147

Neighbor

gene id symbol gene type direction distance location
XLOC_013106 mob2b coding upstream 4155 49969568 ~ 50040161 (+)
XLOC_013107 NA coding upstream 38522 50004734 ~ 50005794 (+)
XLOC_013105 NA coding upstream 130458 49906024 ~ 49913858 (+)
XLOC_013104 si:cabz01090165.1 coding upstream 597274 49411417 ~ 49447042 (+)
XLOC_013102 CABZ01070258.1 coding upstream 684531 49282063 ~ 49359785 (+)
XLOC_013109 scamp5b coding downstream 42853 50089000 ~ 50100149 (+)
XLOC_013110 NA coding downstream 81342 50127489 ~ 50127777 (+)
XLOC_013111 insyn1 coding downstream 229786 50275933 ~ 50356788 (+)
XLOC_013112 CU896640.1 coding downstream 415834 50461981 ~ 50463268 (+)
XLOC_013113 NA coding downstream 443131 50489278 ~ 50490440 (+)
XLOC_013103 NA non-coding upstream 686831 49356457 ~ 49357485 (+)
XLOC_013099 BX663503.1 non-coding upstream 829293 49193824 ~ 49215023 (+)
XLOC_013115 NA non-coding downstream 489906 50536053 ~ 50539640 (+)
XLOC_013116 NA non-coding downstream 574687 50620834 ~ 50622195 (+)
XLOC_013122 CABZ01102517.1 non-coding downstream 736100 50782247 ~ 50786520 (+)

Expression


Co-expression Network