XLOC_013122 (CABZ01102517.1)


Basic Information

Item Value
gene id XLOC_013122
gene name CABZ01102517.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007129.7
NCBI id CM002902.2
chromosome length 51023478
location 50782247 ~ 50786520 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00026045
gtgtgtggggacggcactgtggctcagtggtcagtactgtggcctcacagcaagaaggtctctggtttgagtctcggctgggtcagttggtgtttctgtgtggagtttgcatgttctccccgtgttggcgtgggtttcctccgggtgctccggtttcccccacagtccaaacacagtagtgtatgagtgtgtgtgtgtgtgtgaatgagtgtgtgtgcgggtgtttcccagtactgggttgcagctggaagggaatccactgtgtaaaacacatgctggaatagttagcggttcattccgctgtggcgaccccacaacATATTTAAGTTTAATATATATCATCCAACATAATGCAGATATCACGACAGGTCTACTAATGACCTCTGATATGACCCCACTCACATTTCCTAACGGATGAATGATCCAAAACTGAACTTGCATATATGGATGCTGAAACATCGGTGTATGTTGGCTGATCTGACATCAGTTTTTACAGCATCTTAACCCTGATCAATAACTCAACTGATCATCTGGATCAATCCTCCTGCAAAACAGACACTGACTCCTCAAGCAGAAAACATCTTAACATCACACTTTAATCCAGTCTCTAGAGCATCAGCAGACGCCTCTGCAAggtcactacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttctgtttgCCTTCATTATCTACTGTTTATCCTTCACTAATTCACTTTCAGGAGTCCTTCAGCAGTGTCtcacttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataattagcACTGCTCTGAATGATAATTGATGATCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGCATACGGAAACCTGCGCTTCCACTTCACCATGggtatgtctgtgtgtgagagtgtgtgtgtgtgtgtgtgtgtgtgtccaccagCTCTGTGTTTGACCGCTGTGTTTCCTGCAGGTGGTGGAGGCTGTGATCCTGGAGAGTCCAGCAAGAATAACGTGATCGTCTTCGGCCGCTCGGAGGGCAGGAAGGAGCACGTGCTGCTGGATGTCCTGCCATACTCCGCCTACAGGACCCCTGCAGTGGTGTCCATCAGTCTGCCCACTGAGCTGCAGACTCCACACACTCAGTTCTGTCTGGAGCAGGAGACTCACGCCGGACAGAACCGGCAGGTGTGGGCGCTGGACTTCCTGCAGCTCTTACCTGTGCAGCCTGGAGCGAACACACACCTGCTGCAGTTCTCCATTAACCTGGGCTGCGGAGCGTACCAGCCGGCCAACAGTGTCAAACTGGAGTTCTCCACCAATCAGGGCCGCTCCTGGGCTCTCCTGCACACCGAGTGTCTTCCGGAGGTGTGTTCTGGAGCCCACCTTCCCCACAGCAGCATCTACTCCTCCGAGAACTACAGCGGcTGGTCCCGGATCAGCATCCCTCTGCCCAACGCCGCGCTGACGGAGAGTACACGCTTCCGCTGGAGGCAGAGCGCTGCGGGGACCGGGAACATGTGGGCCATCGACAACGTGTACATCGGGCCGTCCTGCCTGCGGTTCTGCTCCGGCAGAGGACATTGCTCCCGCACTGGCTGCCGGTATGATGAGCCTGCGCTCCtgctgacacacatacacacacaaacacactcatacacacacccTGTTCTGACCGCTCTGCACTGTGTCCCTCAGGTGTGACCCGGGCTTCAGTGGCCCGGCGTGTGAGCTGGCGTCGCAGGCGTTCCCGGCGTTCCTGTCGGAGAGTTTCTCCAGCGCACGTCTCTCCTCATACCACTGCTTCAGCTCGCTGCGCGGCGCCGAGGTCAGCTTCGCCTGCGGGGTTCTGGCCAGCGGGAAAGCCCTGGTGTTCAACAGAGACAGCAGGAGACACCTCATCACCACTGCACTGGACAGCTCACAGgccaggtgcacacacacacacacacacacacacacacacacacacacacacacacacagttcagtacAGTACAGACACTCATGCTACAGCTCAGAAACAACTGTTTTTAATCATattcccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttttgttaaataaaatgtttatcagTTGACTATAAACAATTATCTTCAGGAATATGGAGAGTAATTTTTCTAACATACAATATTTGCAGACTGAAATGACATTTTGCAATGGTTTTTCTCCAAACCTGGGAAAGTGATGGC
>TCONS_00026044
gtgtgtggggacggcactgtggctcagtggtcagtactgtggcctcacagcaagaaggtctctggtttgagtctcggctgggtcagttggtgtttctgtgtggagtttgcatgttctccccgtgttggcgtgggtttcctccgggtgctccggtttcccccacagtccaaacacagtagtgtatgagtgtgtgtgtgtgtgtgaatgagtgtgtgtgcgggtgtttcccagtactgggttgcagctggaagggaatccactgtgtaaaacacatgctggaatagttagcggttcattccgctgtggcgaccccacaacATATTTAAGTTTAATATATATCATCCAACATAATGCAGATATCACGACAGGTCTACTAATGACCTCTGATATGACCCCACTCACATTTCCTAACGGATGAATGATCCAAAACTGAACTTGCATATATGGATGCTGAAACATCGGTGTATGTTGGCTGATCTGACATCAGTTTTTACAGCATCTTAACCCTGATCAATAACTCAACTGATCATCTGGATCAATCCTCCTGCAAAACAGACACTGACTCCTCAAGCAGAAAACATCTTAACATCACACTTTAATCCAGTCTCTAGAGCATCAGCAGACGCCTCTGCAAggtcactacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacttctgtttgCCTTCATTATCTACTGTTTATCCTTCACTAATTCACTTTCAGGAGTCCTTCAGCAGTGTCtcacttctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtataattagcACTGCTCTGAATGATAATTGATGATCATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCGCATACGGAAACCTGCGCTTCCACTTCACCATGgGTGGTGGAGGCTGTGATCCTGGAGAGTCCAGCAAGAATAACGTGATCGTCTTCGGCCGCTCGGAGGGCAGGAAGGAGCACGTGCTGCTGGATGTCCTGCCATACTCCGCCTACAGGACCCCTGCAGTGGTGTCCATCAGTCTGCCCACTGAGCTGCAGACTCCACACACTCAGTTCTGTCTGGAGCAGGAGACTCACGCCGGACAGAACCGGCAGGTGTGGGCGCTGGACTTCCTGCAGCTCTTACCTGTGCAGCCTGGAGCGAACACACACCTGCTGCAGTTCTCCATTAACCTGGGCTGCGGAGCGTACCAGCCGGCCAACAGTGTCAAACTGGAGTTCTCCACCAATCAGGGCCGCTCCTGGGCTCTCCTGCACACCGAGTGTCTTCCGGAGGTGTGTTCTGGAGCCCACCTTCCCCACAGCAGCATCTACTCCTCCGAGAACTACAGCGGcTGGTCCCGGATCAGCATCCCTCTGCCCAACGCCGCGCTGACGGAGAGTACACGCTTCCGCTGGAGGCAGAGCGCTGCGGGGACCGGGAACATGTGGGCCATCGACAACGTGTACATCGGGCCGTCCTGCCTGCGGTTCTGCTCCGGCAGAGGACATTGCTCCCGCACTGGCTGCCGGTGTGACCCGGGCTTCAGTGGCCCGGCGTGTGAGCTGGCGTCGCAGGCGTTCCCGGCGTTCCTGTCGGAGAGTTTCTCCAGCGCACGTCTCTCCTCATACCACTGCTTCAGCTCGCTGCGCGGCGCCGAGGTCAGCTTCGCCTGCGGGGTTCTGGCCAGCGGGAAAGCCCTGGTGTTCAACAGAGACAGCAGGAGACACCTCATCACCACTGCACTGGACAGCTCACAGgccaggtgcacacacacacacacacacacacacacacacacacacacacacacacacagttcagtacAGTACAGACACTCATGCTACAGCTCAGAAACAACTGTTTTTAATCATattcccctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttttttgttaaataaaatgtttatcagTTGACTATAAACAATTATCTTCAGGAATATGGAGAGTAATTTTTCTAACATACAATATTTGCAGACTGAAATGACATTTTGCAATGGTTTTTCTCCAAACCTGGGAAAGTGATGGC

Function

GO:

id name namespace
GO:0048731 system development biological_process
GO:0022610 biological adhesion biological_process
GO:0007275 multicellular organism development biological_process
GO:0001525 angiogenesis biological_process
GO:0048856 anatomical structure development biological_process
GO:0007399 nervous system development biological_process
GO:0032501 multicellular organismal process biological_process
GO:0032502 developmental process biological_process
GO:0001944 vasculature development biological_process
GO:0007155 cell adhesion biological_process

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000117626

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00026045 False 2377 lncRNA 0.50 5 50782247 50786520
TCONS_00026044 True 2202 lncRNA 0.50 7 50782247 50786520

Neighbor

gene id symbol gene type direction distance location
XLOC_013121 rap2b coding upstream 72532 50707179 ~ 50709715 (+)
XLOC_013120 p2ry1 coding upstream 90142 50684059 ~ 50692105 (+)
XLOC_013119 si:dkey-151j17.4 coding upstream 109731 50650512 ~ 50672516 (+)
XLOC_013118 chrna3 coding upstream 133771 50638006 ~ 50648476 (+)
XLOC_013117 chrnb4 coding upstream 146828 50627085 ~ 50635419 (+)
XLOC_013123 CABZ01102518.1 coding downstream 113 50786633 ~ 50790250 (+)
XLOC_013124 tspan4a coding downstream 14787 50801307 ~ 50823466 (+)
XLOC_013125 shank2a coding downstream 93576 50880096 ~ 50889524 (+)
XLOC_013126 shank2a coding downstream 104229 50890749 ~ 50911958 (+)
XLOC_013127 pik3c2g coding downstream 138036 50924556 ~ 50936344 (+)
XLOC_013116 NA non-coding upstream 160052 50620834 ~ 50622195 (+)
XLOC_013115 NA non-coding upstream 242607 50536053 ~ 50539640 (+)
XLOC_013113 NA non-coding upstream 291807 50489278 ~ 50490440 (+)
XLOC_013110 NA non-coding upstream 654470 50127489 ~ 50127777 (+)
XLOC_013108 NA non-coding upstream 736100 50044316 ~ 50046147 (+)

Expression


Co-expression Network