CI01000321_00098493_00100489


Basic Information

Item Value
gene id CI01000321_00098493_00100489
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 98296 ~ 100586 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_00098493_00100489.mRNA
ACTTAAATTGACTGTGCGCTACGGTGCAAAGACATTGCCCTCATTTATCTTCCAAGTGGCCTGCAAAGGAGCAAATTTAATGGGACTGGACTTGTTCACCGTGCTGGGGTTCGCCCGCTGCTATCCTGGCTGTGACCGCAATATGGCAGCAACAGCGGCCAACGCTGTTTGATGGGCTGGGCTGCCTCACCTCATTCATGCACCAGCCTCTCATTGACCATACTGTCAGCCCTGTCATTCAGCCACTACGCCGTATTCCCCTGGCCCTGCGGGAGGGGGTGTCAACGGAACTACAGCGCCTGCTGCGAGCAGGCATCATTGAGCATGTGGATGCGTTGCCCTGGGTCTCAAACCTGGTGGTGGCCACTAAAAAATCTGGTGCTCTGTGCATCTGCTTGTACTTGCGGCAAGTCAATAAGGCAGTTGTTCCAGATAAGTACCCGCTACCAATGACGGAGGAACTCACGGCTCAATTCTATGATTCCACAGTGTTTTCTAAGCTGGACCTAAGAGAAGGCTATCTGCAGGTGCCCCTCCATGCTGACAGCAGAAATCTGACGACTTTTGTGACACATGAGGGAGATTTTCGTTATACTAGGATGGCTTTCGGCCTTAGCTCCGCCCTTTCCTGTTTCCAAAAGGTCATGACCTCTGTGCTAGCGGGAATACCAGGCGTCGTCATCTACCTTGACGACATTGTCGTGCATGGACCCACAATGCACACTCATGATGAGCACCTCAACAGGGTTTTTGATGCACTCAGCAAGCACAGGCTAAATTTAAATGGCGTAAAATGCCTTTTTGCTGTACCCGTCATCGAGTTTGTGGGGTTCAAGTTGTCAACACAGGGCATTTCCCCACTCCAGTCTAATGTGGAGGCCATTCAGTCCATCCCCAAGGCTTCCTTTCTAGGGATGACAGGCTACTACTTAAAGTTTCTGCCTCAGTATTCGGCCACTACTGCCCCACTGCAGCAATTACTCCGGAAAGATGAGCCCTGGGTGTGGACGCAGGCATGTATGGAGGCCGTGCGCGCCCTCAAGGCCCAACTCACTTCACCTCCCATACTTTCACACTTCAGCACCTCCTGTAAAACAATGGTCACCTGCGATGCATCTGCCACAGCCATCGGAACTGTATTGTCACAGCACCTGCAGATGGATATCTGCAGTGAATTTCATGGGGTTCCCTACAACCAGCGATATCTTGTGGTAGCATATGATTTGCACTCCAAATGGCCAGAACTAACCACCACCAGCTCAGTCACCACTCAAGTCATCGTGAACTTTCTGGACTCACTGTTCTCCCGTTGGGGCCTTCTACAAACTATTACAATGGATAACGGCCATCAGTTCGTCTCAGTAGACTTCTCTTCTTACCTGGAGAACAAAGGTATCCAACAAATCCACACCACCCTTTACCACCCCCAGGCCAATGGGGGAGTGGAACGTTTCCACCAGTCTTTGAAAAATGACCTTAGGGCACACCTGGCACAAGGGTGCTCTTTCAACCAAGTCATTCGCCTGACATTGCTACACTACCAGGCCTCGTGGCATAGCACCACTGGGGTCTCCCCTGCCTTCCTAAAGTTGGGCAGGGAACTCACTTTGCCGCTGGACAGACTCCGCCCCTCCACACCCAAGGGACCCCCCCTTGGGGTTAAAACCCACATCACTCGCCAGTAGCGCCGGATGAAACAGAGATTTGACAGGCTCCAATGTGCCAAAGAGTCAGATATTGCAGTTCAGGACTGGGTGAGAGTTTGCAGACCACACAGGAGGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_00098493_00100489.mRNA True 1782 mRNA 0.52 2 98296 100586

Neighbor

gene id symbol gene type direction distance location
CI01000321_00150756_00152124 NA coding downstream 50170 150756 ~ 152189 (+)
CI01000321_00283589_00284224 NA coding downstream 182738 283324 ~ 284337 (+)
CI01000321_00326486_00355049 NA coding downstream 225807 326393 ~ 355202 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 340796 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 409968 510554 ~ 516356 (+)
G456509 NA non-coding upstream 7361 85758 ~ 90935 (+)
G456539 NA non-coding upstream 35735 62358 ~ 62561 (+)
G456537 NA non-coding upstream 37201 60864 ~ 61095 (+)
G456525 NA non-coding upstream 62680 34125 ~ 35616 (+)
G456514 NA non-coding upstream 73808 24277 ~ 24488 (+)
G456510 NA non-coding downstream 5367 105953 ~ 125908 (+)
G456573 NA non-coding downstream 34929 135515 ~ 135725 (+)
G456582 NA non-coding downstream 75797 176383 ~ 176794 (+)
G456583 NA non-coding downstream 77210 177796 ~ 178392 (+)
G456588 NA non-coding downstream 85046 185632 ~ 186342 (+)
G456774 NA other downstream 325497 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 717878 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3688732 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3906040 4013468 ~ 4015412 (+)
G459303 NA other downstream 4384811 4485397 ~ 4488552 (+)

Expression


Co-expression Network