Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000321_00326486_00355049 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 326393 ~ 355202 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| description |
|---|
| Retrovirus polyprotein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000321_00326486_00355049.mRNA | True | 5310 | mRNA | 0.48 | 7 | 326393 | 355202 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_00283589_00284224 | NA | coding | upstream | 42056 | 283324 ~ 284337 (+) |
| CI01000321_00150756_00152124 | NA | coding | upstream | 174204 | 150756 ~ 152189 (+) |
| CI01000321_00098493_00100489 | NA | coding | upstream | 225807 | 98296 ~ 100586 (+) |
| CI01000321_00441382_00448773 | RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 | coding | downstream | 86180 | 441382 ~ 448780 (+) |
| CI01000321_00511077_00516356 | NA | coding | downstream | 155352 | 510554 ~ 516356 (+) |
| CI01000321_00549095_00550611 | NA | coding | downstream | 193893 | 549095 ~ 550648 (+) |
| CI01000321_00559268_00567811 | NA | coding | downstream | 204066 | 559268 ~ 568138 (+) |
| CI01000321_00649226_00658653 | NA | coding | downstream | 294024 | 649226 ~ 658950 (+) |
| G456751 | NA | non-coding | upstream | 756 | 325425 ~ 325637 (+) |
| G456730 | NA | non-coding | upstream | 10528 | 315397 ~ 315865 (+) |
| G456725 | NA | non-coding | upstream | 20170 | 305966 ~ 306223 (+) |
| G456711 | NA | non-coding | upstream | 24323 | 301793 ~ 302070 (+) |
| G456691 | NA | non-coding | upstream | 62558 | 263583 ~ 263835 (+) |
| G456780 | NA | non-coding | downstream | 36990 | 392192 ~ 392416 (+) |
| G456782 | NA | non-coding | downstream | 40840 | 396042 ~ 396304 (+) |
| G456775 | NA | non-coding | downstream | 48170 | 403372 ~ 403765 (+) |
| G456791 | NA | non-coding | downstream | 130354 | 485556 ~ 485862 (+) |
| G456793 | NA | non-coding | downstream | 131601 | 486803 ~ 487488 (+) |
| G456774 | NA | other | downstream | 70881 | 426083 ~ 427025 (+) |
| CI01000321_00815160_00819665 | NA | other | downstream | 463262 | 815160 ~ 819749 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 3434116 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 3651424 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 4130195 | 4485397 ~ 4488552 (+) |
