CI01000321_00981761_00983302


Basic Information

Item Value
gene id CI01000321_00981761_00983302
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 981501 ~ 983955 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_00981761_00983302.mRNA
CAATAAAAACAGCCCATAGCGTGTGACAAACGAAGAGTGTGAACTAGTTTTTGAAAAACCCCTAATTCTTTACTGAAGGTTGGGCCAATGAATGGCGCATGCTCAGTGCGAATAGGGAGTGTTGGAGACAGCCAACAGTGCAGGGAAAGGCAAGACGGGTGAAAAGAGAAGCCCGTCTTCCTTTCGAAAACGGAAAAATACGTTAACGGAGCTTCGTTGTATGTCCTTGTTTCACACCCGGCCATGCCAACGACACAGCGATGTATTACTACTGCAATCGGAATAAAATGAGCGCTAGTGCAGCCGGGCCTGGAGTGGAGAGTTGCGGGGCCGGGTGTCCGCATAGCGCCAGCCGCTGCTGCGGGGGAGGAGGCTGCGGTGAGCCCGTCAGCGGTGACGGAAGCTCGGCCGCTGCGGCTACAGCCACCAGCGCTGCCCCAGTGCGGAGCTCAGACAGGGAGAGCAGCGTAGCCGAGGCCCAGGCGTTCCGCGAATGGGACGATGCCACCTCCGTTGATACGGATCCGGCCCAGAAAATGAACGAGGAGGGATTTTTTACGAACGGCGCTGCTGATATCACACGGGAGGGAGACGAATGCGCGGAATCGGGGGAATACGGTGGAGGACGCGGGCGTTTTTGTAGACAAAGCGCTGGAGCGGGCGAGGATAACAGCATTAATATTGATCACGAAGGAGCTGGTTTGCGGTGTTTCATGAGCGCTACCATACGGAGGGACGAGCGCAGACCGAGCGTGAGACTGCCGCCGGTGCGCACCGCGAGAGCACGGCGAGGACACACGGCGCACACCGAGACCGACCGCGCGATGATGACAGCCGCTGCAAGGTGTGGTCACGGGAATTCTGAGCCCGCGGTCATTAAGCGCCGAGGATGCAGTTTCACCCGAGTGTCCAAGAGGGTGTGTTTCTCGGGCACGTACTGCGGCAGCTCGGACGCCGTGGCCCGCGTTGGTTCCAATGGTGAAGCTCACGTGAAGCGGTCCGCGAGCACTGCCGAGACTTTCAAGCGCACATCCTTACGTCGTATCCAGTGCGAGAACACTACCGGGGCCCAAAAAATGAATTTTGCAGCTTGCCCGCCTGATGAAAATGCCCAACTGCCCACATCCAGAACGGCGAAGGGGCGCGTCAGACTGTACAGGGTGCGCTCCTTTCTTGCCAGCTCTGCCAACCATAACAACGGGGTCAGCGGAAACGGTGCCTCTCACAATAACCTCCCACCGCAACCCTCCCTCCAAGCCCCCGAGCCCAAGTATGACCTACGTGATTGCGCAAAAAAGCCCATGTGTGCCCTTTCCATCAGTTCTTCTCAGTCTGAGAGTGGGCCTCCTAACGGGACAGAGCCAGAGCCACAGAAGTGTGATGGTACATGTGTGGGCATTGATGCCGAGGGGACTGAGGGCCCCAGCACAGAGCAGATAGAGGCAGTGAGGGGTGAAGCCGAGCGCAGGCAGGCAGAGCTGGAGGGTCGTACCGACCACCTCTGGAGGCGCCTGCAGGCCGTGCAGGTGAAGCAGGTGGAGAGGCATGTCACTCAGCAACTGCGTGGCCTATACAGGAGCCCGGGGTTGAGCTGCACCAGGAGGCCCAGCGCCGTATCCAGAAACTCGACTGAGCTGAGCAGGCTGGCACGCAGCTGCAGCGAGATCCTCCGGACTGCAGAGAGTGCTCTGGACTCGGACCACACAGCCAGCAGCTCCGGAGGTGACAGCGACAGTGAGGAAGATCAGGGATTGGAGAGAGGAGGTCATCGCTTTAGACCGCTGTCATTAAAATCAATGTAAGCTTTCACATTATGCTTAGCCCTAGGTTAAGATCTCTTAACCCCGAGTTAAGGAATGTTTTAAACCACTAATTTTGAAAGGAGTCAGCAGTGCTCCATTATGATATGCCAAAGATAAAAAGCCCAGGGTGATGGAACAAAATAACCATGATTAAAGGGATAGTCCACACAGAAATTAAAATTCTGTCATAATTTACTCACCTTCATGTGCATTCTAAACCTGTAACACTTTCGGTTCCCATTGACTTCCAGTGTATTTTTTTTTGTCCATACAACGGAAGTCAATAGGAATCAAAACTGTTTTGTTATCGACATTCCTAAAAGTATCCTCTTTTGTGCTCAGAAGAAGAAAGTCATACAGGTTTGGAATCACATGAGGGTGAGTAAATAATGACAGAATGAAATATGATTATTGGGTAGACTATCCCTTTAAAAATGACAATTTTCTAGCAATTTCAAACACTCTGCCTTCTCGTATATACATGTATGTACACCTACACATGCATATGTACAATATGCTTCAGATGAGTCATTGCATGTTGGTGTTGCATTTGAATCACCACTGTACCATTCAGTATAAATGCTGTACTGGCAGTTGATTCATGGCCGCCACATTGAGAGGCTACAAAGCCCTTTTTCGCTGGGCTGTCGATA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_00981761_00983302.mRNA True 2455 mRNA 0.53 1 981501 983955

Neighbor

gene id symbol gene type direction distance location
CI01000321_00909867_00919491 NA coding upstream 61023 909438 ~ 920478 (+)
CI01000321_00887320_00899893 MRPL3 coding upstream 81379 887320 ~ 900122 (+)
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding upstream 101808 844294 ~ 879693 (+)
CI01000321_00815160_00819665 NA coding upstream 161752 815160 ~ 819749 (+)
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding upstream 190492 785868 ~ 791009 (+)
CI01000321_00986344_00991651 NA coding downstream 2389 986344 ~ 992510 (+)
CI01000321_00994911_00997021 ASTE1 coding downstream 10956 994911 ~ 997093 (+)
CI01000321_01010375_01014716 NA coding downstream 26420 1010375 ~ 1014726 (+)
CI01000321_01065033_01086306 JAZF1, JAZF1A coding downstream 81078 1065033 ~ 1087823 (+)
CI01000321_01122567_01145051 HIBADH, HIBADHB, HIBADHA, HIBADH.S coding downstream 138612 1122567 ~ 1145051 (+)
G456931 NA non-coding upstream 74096 907166 ~ 907405 (+)
G456930 NA non-coding upstream 77903 903362 ~ 903598 (+)
G456929 NA non-coding upstream 94777 886475 ~ 886724 (+)
G456928 NA non-coding upstream 95686 885491 ~ 885815 (+)
G456926 NA non-coding upstream 97681 883383 ~ 883820 (+)
G456953 NA non-coding downstream 32373 1016328 ~ 1016631 (+)
G456976 NA non-coding downstream 112672 1096627 ~ 1099111 (+)
G456978 NA non-coding downstream 113119 1097074 ~ 1097710 (+)
G456977 NA non-coding downstream 115737 1099692 ~ 1160094 (+)
G456973 NA non-coding downstream 121270 1105225 ~ 1115313 (+)
G456774 NA other upstream 554476 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2805363 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3022671 4013468 ~ 4015412 (+)
G459303 NA other downstream 3501442 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3531579 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 3763457 4747650 ~ 4749579 (+)

Expression


Co-expression Network