Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000321_01348009_01350252 |
| gene name | NA |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 1348009 ~ 1351774 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000321_01348009_01350252.mRNA | True | 1981 | mRNA | 0.33 | 3 | 1348009 | 1351774 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_01342947_01344272 | NPVF | coding | upstream | 3398 | 1342900 ~ 1344611 (+) |
| CI01000321_01242644_01243808 | HOXA1A, HOXA1 | coding | upstream | 103596 | 1241961 ~ 1244413 (+) |
| CI01000321_01238511_01240051 | NA | coding | upstream | 107683 | 1238374 ~ 1240326 (+) |
| CI01000321_01227049_01234989 | HOXA3A | coding | upstream | 112864 | 1226351 ~ 1235145 (+) |
| CI01000321_01221875_01223087 | HOXA4, HOXA4AB, HOXA4A | coding | upstream | 124394 | 1221564 ~ 1223615 (+) |
| CI01000321_01362387_01381302 | OSBPL3, OSBPL3A | coding | downstream | 10613 | 1362387 ~ 1382657 (+) |
| CI01000321_01411682_01416499 | NA | coding | downstream | 59908 | 1411682 ~ 1416536 (+) |
| CI01000321_01473475_01476619 | CCDC126 | coding | downstream | 121701 | 1473475 ~ 1477216 (+) |
| CI01000321_01477590_01479280 | NA | coding | downstream | 125816 | 1477590 ~ 1479280 (+) |
| CI01000321_01480684_01483493 | NA | coding | downstream | 128910 | 1480684 ~ 1483792 (+) |
| G457000 | NA | non-coding | upstream | 48162 | 1295466 ~ 1299847 (+) |
| G457001 | NA | non-coding | upstream | 54792 | 1284368 ~ 1293217 (+) |
| G457034 | NA | non-coding | upstream | 81344 | 1266462 ~ 1266665 (+) |
| G457033 | NA | non-coding | upstream | 82252 | 1265543 ~ 1265757 (+) |
| G457025 | NA | non-coding | upstream | 102373 | 1245299 ~ 1245636 (+) |
| G457104 | NA | non-coding | downstream | 34775 | 1386549 ~ 1386987 (+) |
| G457106 | NA | non-coding | downstream | 36579 | 1388353 ~ 1388687 (+) |
| G457107 | NA | non-coding | downstream | 36958 | 1388732 ~ 1389229 (+) |
| G457108 | NA | non-coding | downstream | 37817 | 1389591 ~ 1390054 (+) |
| G457109 | NA | non-coding | downstream | 39144 | 1390918 ~ 1391184 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 525162 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 920984 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 2437544 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 2654852 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 3133623 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 3163760 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 3395638 | 4747650 ~ 4749579 (+) |
