CI01000321_01477590_01479280


Basic Information

Item Value
gene id CI01000321_01477590_01479280
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 1477590 ~ 1479280 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_01477590_01479280.mRNA
ATGAGTGATGTCGAGGAGCCACAATTCGAGGGGAGGGTTATTGGTCGTGAAGGATTTGAAGAGTTAAGGCCAAGAATGTGGAAGAATATTCAAGATAAAAGAAGGCTTTTACAGAGAAAATGTTTACAGAGCAGACGGTTAAGTGGGAAGGGGAAAAAAGAACGGAAGATCGGTCAGATAGAAGCACGGTCGCGTTATGTGTCTAAAGCAGAAAAAAGAAAAGAGGAATCCCGCTCGCCATCCAAATCGGAGCGGGGCAGTCCTGCCCAACCCAAGACGGAGAGCAGGTCTGGCACTCCCAGCCCTTCCCGAGCATCCAAACGTTCTGAGTCAAGATCCCGATCCCGCTCCAAGTCCAGGTCCCGCTCTCGTCGGCATTCAAATCGCCGATACAGCCGTTCTCGGTCTCACTCCCACCGGAAGAAGTCTCGCTCTCGCTCCTACAGCCCTGACTACCGACGCAGACGGAGCCAGAGCACATCGCCCATGTCTAACCGCCGCAGACACACTGGCAGCCGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_01477590_01479280.mRNA True 519 mRNA 0.54 4 1477590 1479280

Neighbor

gene id symbol gene type direction distance location
CI01000321_01473475_01476619 CCDC126 coding upstream 374 1473475 ~ 1477216 (+)
CI01000321_01411682_01416499 NA coding upstream 61054 1411682 ~ 1416536 (+)
CI01000321_01362387_01381302 OSBPL3, OSBPL3A coding upstream 94933 1362387 ~ 1382657 (+)
CI01000321_01348009_01350252 NA coding upstream 125816 1348009 ~ 1351774 (+)
CI01000321_01342947_01344272 NPVF coding upstream 132979 1342900 ~ 1344611 (+)
CI01000321_01480684_01483493 NA coding downstream 1404 1480684 ~ 1483792 (+)
CI01000321_01491101_01521160 IGF2BP3 coding downstream 11613 1490893 ~ 1521421 (+)
CI01000321_01540466_01544669 NA coding downstream 61186 1540466 ~ 1545019 (+)
CI01000321_01652980_01708876 KCNH8 coding downstream 173700 1652980 ~ 1709553 (+)
CI01000321_01734972_01738515 RAB5AA, RAB5A.L, RAB5A, RAB5AB coding downstream 255318 1734598 ~ 1738519 (+)
G457139 NA non-coding upstream 8046 1469343 ~ 1469544 (+)
G457133 NA non-coding upstream 24307 1451277 ~ 1453283 (+)
G457121 NA non-coding upstream 46169 1430229 ~ 1431421 (+)
G457090 NA non-coding upstream 59480 1394386 ~ 1418110 (+)
G457112 NA non-coding upstream 83849 1393541 ~ 1393741 (+)
G457100 NA non-coding downstream 5845 1485125 ~ 1486634 (+)
G457160 NA non-coding downstream 139623 1618903 ~ 1619330 (+)
G457183 NA non-coding downstream 332137 1811417 ~ 1811668 (+)
G457191 NA non-coding downstream 341861 1821141 ~ 1821502 (+)
G457245 NA non-coding downstream 447895 1927175 ~ 1927611 (+)
CI01000321_00815160_00819665 NA other upstream 654743 815160 ~ 819749 (+)
G456774 NA other upstream 1050565 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2310038 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 2527346 4013468 ~ 4015412 (+)
G459303 NA other downstream 3006117 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3036254 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 3268132 4747650 ~ 4749579 (+)

Expression


Co-expression Network