CI01000321_02205260_02210288


Basic Information

Item Value
gene id CI01000321_02205260_02210288
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2204517 ~ 2210526 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_02205260_02210288.mRNA
CTTTTAAAACGATGGGCAGATTCTATTTCCTGTCCATCAATCAGCCACTTAAAATGTACTATGCTTGAGATTATGACGAGCAAATTACACATACAAGAGCTCTCAGCTTCAAAATGGTTATGAGAGTCGTTAAGAGTGTAATTAACCTTGTGTTAAGTGGCATTTACTAATGATTAATGTGCAGTATTATAAAGGCAGATTGTTTCCTAAAATGAATACCTCGAACATAGCCAGTTTAAGGCTAATTGATCCAGACATCAATAACCCAATGTGGGATCAATTACAGCGCCTATTATCAGAGCGACAGCAGAACGGGCCAGCTTTTAGTTGACACAAATGGCTTACTTACTTAGTGATATAAATTTATTGTGCCATATTTGCTGACAATACATTGCAGGACATGTAGGTTTTGTTGTGAATTGAACTTTGCATCTGGAGAGTTTGCAATGTACCAAATACAGGAATTTCAGTGTCTTCAAGAGCCGTCAAGTCGAATCTTGATGAGAAGGGGCTTTTGAGGACTTTGTCTCTCTCCTTGTTCTTTGTCCGCTCCGCTGACCCGCTGTTAAGCTCTGTATTTGTGTAGCTTCTGCTATGTGTTAGGCCTCTGCCCCTCTGTCCCTTTCTTTCTCTCATCCTCTCTGTCTCCCCCTTTTGCTCGCTCTAGTTTTATATGAGTCCATGCGTGTGTGTTTGTGTGCGTGTGAGGCCCTGGCTTCTCAGTCTGCCTTTCACAGAGCGAGATGCCTGTCATTCTAATCAGCCGGCTGCCCATCTCTTCCACCACCAGCTGGCTGAGTCAACAAGAGAGAGGGCGAGTGTCTGAGTTGACTGGGCTGCCAAAGAACATATGCCCCTGTAACGGTATCTACTCTCCGAGCCCTGAGCGCTGGAACTCGCGGTCTTCTCTAGCTGGCAGGGCCGTCTATGATCCGTGTCTGTTAAACCCATGTCTGACTGACACTGCCAGTGAGCTGGGTCCTGACACGCTGACGCTGAGCCGATCTGACACGCCGGAGCTCGTGCTGGATTCCTCCGTTCGCCGCTGCGGAGAAGTGCGGCTCTCTCCATTCATTACTGTCAGCATAGTGAGGGGCCTGCAGGCAGAGGTCGTCCGCCAGGGGTCCGCTCTCCGCTCTCAACCCCGCGGTACCCGTCACTCCAACCTGCTCCGCCGGTGCCCTAAACCCTCCATTAGCAAGGCTCCGGGTCGCGACCTCGCTGTGGCATTTGCAATTCCAGATCGTTTGATTAGCAGCGTATTTACATATTTCCGCCGCAGACACTGTTGGGGTGTCGGAAACACTTGAAGTGTTGTAATTTTCTCTGGCCTTTTTGTCGCGTGGCGATCGGGGCCCACGCACACACAAATATGCACATGCACTTCTTTTCTACTCATCTCCGATGACAGTGACAGCGTCCTTCGCTTTCCTGCGACAACTCTACAGTTCTGGTCTGACCCTCAGAGAAGTGCCCAGTGAAGTGGATCACAGTCCCGTCTGAATTCCCCAAAGATGGGTGGCCTCTTGCCTTTTAAATCTAGTCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_02205260_02210288.mRNA True 1548 mRNA 0.49 2 2204517 2210526

Neighbor

gene id symbol gene type direction distance location
CI01000321_02069556_02082569 NA coding upstream 121175 2069254 ~ 2083342 (+)
CI01000321_02060877_02067096 TSHZ1 coding upstream 136996 2060877 ~ 2067521 (+)
CI01000321_01789650_01796167 CNDP2 coding upstream 408000 1789304 ~ 1796517 (+)
CI01000321_01778626_01782120 TXNL4A, TXN4A, BRAFLDRAFT_119072, TXNL4A.S coding upstream 422182 1778626 ~ 1782335 (+)
CI01000321_01773447_01776531 ADNP2B coding upstream 427973 1773072 ~ 1776544 (+)
CI01000321_02306311_02308161 GALR1, GALR1A coding downstream 95595 2306121 ~ 2308202 (+)
CI01000321_02359797_02366314 SALL3B, SALL3 coding downstream 149271 2359797 ~ 2366359 (+)
CI01000321_02371786_02421055 ATP9B coding downstream 161135 2371661 ~ 2421699 (+)
CI01000321_02433523_02469055 NFATC1 coding downstream 222997 2433523 ~ 2469069 (+)
CI01000321_02508568_02513821 NA coding downstream 298042 2508568 ~ 2513907 (+)
G457396 NA non-coding upstream 11901 2192206 ~ 2192616 (+)
G457332 NA non-coding upstream 23356 2179789 ~ 2181161 (+)
G457394 NA non-coding upstream 43781 2159977 ~ 2160736 (+)
G457376 NA non-coding upstream 97054 2107006 ~ 2107463 (+)
G457307 NA non-coding upstream 161415 2030255 ~ 2043102 (+)
G457306 NA non-coding downstream 62274 2272800 ~ 2284518 (+)
G457431 NA non-coding downstream 86968 2297494 ~ 2297733 (+)
G457439 NA non-coding downstream 108882 2319408 ~ 2319655 (+)
G457440 NA non-coding downstream 109479 2320005 ~ 2320367 (+)
G457460 NA non-coding downstream 216394 2426920 ~ 2427188 (+)
CI01000321_00815160_00819665 NA other upstream 1381670 815160 ~ 819749 (+)
G456774 NA other upstream 1777492 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 1578792 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 1796100 4013468 ~ 4015412 (+)
G459303 NA other downstream 2274871 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 2305008 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 2536886 4747650 ~ 4749579 (+)

Expression


Co-expression Network