CI01000321_02606321_02610175


Basic Information

Item Value
gene id CI01000321_02606321_02610175
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2605975 ~ 2610565 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_02606321_02610175.mRNA
ATAAATTATCATGGGGCTGAGATGCATTTACAGTCAGAGGCAGTGCACTATTTTAAAACAAACCATTTATCTTTTGCTCCAGAAGTTTCCTTTTCCCAGGCAGATAAATGACACAGAAAAAGTAGGAGATCTGAGACCAATTAACATCCATTCATTTTTTCCCCTCTCTCTCCTTTTGAAATGGGCAAGAAACATGCTTGCTTCTGTAGTCTTGACGATCATATTAAGATGTTGCCAACTCAATCTTACCGAAAAACGTATTTCCAGCTTTAGCGCAGACTGCAGAGTGAAATAAAGACAAACGGGGTCAGAGAGACGAAAAGGAAACGCTGTCGTCCTTCAAGTCATTTTAGTTTAGTAAATCAGACTAATTGCTTTAAACAAGCTGTAATGGAGATTGATGATAGTAGTTCCTTCATGGAGGATCTGATCCAGAAGGGCCAAGAGCTTTTTCAGTTCTGCTTGTGTCCTGCTCCATTGATACTGAGTATCTCACCTGCCATCCATCTCATGCTCGATGAATGGATGGCAGGTGAAATTGTACCACACTTAAAAGGAAGTGAGACCAAAAAACCTTGGCACAAGATGTTATGTAATAGTGTGGTAGATGCAGACTCTTATCGGCTGCTGAGGGCAACCTTGCACGGAGCTCACAAACTCGATCCCAGGCCCGATGCCGGCAAACCCTTCTGGAACTGTGTTCCCAACCCTGGTGGTTTTGGGGCATGTGGCCACCTTGATAGCCGTGTGGAGATGGATGCAGCGAAGAAAGCGAGTCAGCGAAGAAGTGTCTTACTGGTATGTCGAGAATGCAAATTGTTATTCTTAGTGTCTAGAAGGAGCCACCTGGTTTCAGTTGTCCCGACAGGGTTAGCCTAAGCCTAAGGTGTTTTACTGTAAGACATTCTGAAAAAAGCTGTTATCAGCTAGTCATCCTGTGAGGGCTGAAGGGACATTTTTCTGTAGGTATGAAGTTAAAGCCCACACCCTAAACCTAACCTTCAAACCTGCCTTTTATCTGTCAGTCTATTTAAATAGATATAGGTGTGGAAAGGTGACCAGTGTCCATAGGCGTGTCATCGGTTACTGTCACTTCAGACAGTAGTGCTTGGATCATTTTCTACCAACAGTAAATACTGACTTGAAAGCCATAATTTACATAATGTGTGTTTATTTGTGCTGTTGAATGGCTATTATTTGCATAATAATGAAAAGTACTAATAAA

Function

NR:

description
Plectin

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_02606321_02610175.mRNA True 1225 mRNA 0.42 5 2605975 2610565

Neighbor

gene id symbol gene type direction distance location
CI01000321_02563851_02571773 PLECA coding downstream 34202 2563851 ~ 2571773 (-)
CI01000321_02550520_02559309 PLECA, PLEC coding downstream 46666 2549992 ~ 2559309 (-)
CI01000321_02522945_02541898 EPPK1 coding downstream 61731 2522683 ~ 2544244 (-)
CI01000321_02502471_02505436 NA coding downstream 100257 2502262 ~ 2505718 (-)
CI01000321_02498196_02501206 SLC52A2 coding downstream 104736 2497354 ~ 2501239 (-)
CI01000321_02656580_02666438 NA coding upstream 46006 2656571 ~ 2666438 (-)
CI01000321_02671166_02689684 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding upstream 59957 2670522 ~ 2689742 (-)
CI01000321_02702079_02702974 NA coding upstream 91294 2701859 ~ 2702974 (-)
CI01000321_02739755_02767802 NUDCD1 coding upstream 128917 2739482 ~ 2767968 (-)
CI01000321_03028470_03033496 NA coding upstream 417832 3028397 ~ 3034891 (-)
G458661 NA non-coding downstream 71163 2534611 ~ 2534812 (-)
G458658 NA non-coding downstream 86220 2510245 ~ 2519755 (-)
CI01000321_02483521_02488846 NA non-coding downstream 116245 2483436 ~ 2491175 (-)
G458654 NA non-coding downstream 124277 2481114 ~ 2481698 (-)
G458587 NA non-coding downstream 182918 2420924 ~ 2423057 (-)
G458648 NA non-coding upstream 57924 2668489 ~ 2669532 (-)
G458651 NA non-coding upstream 59079 2669644 ~ 2670027 (-)
G458672 NA non-coding upstream 94836 2705401 ~ 2705656 (-)
G458682 NA non-coding upstream 104542 2715107 ~ 2715394 (-)
G458686 NA non-coding upstream 109573 2720138 ~ 2721446 (-)
CI01000321_02282824_02284376 MBPA other downstream 321464 2282238 ~ 2284934 (-)
CI01000321_01451689_01453423 NPY other downstream 1152668 1451194 ~ 1453530 (-)
G458122 NA other downstream 1569827 1032063 ~ 1036148 (-)
G456607 NA other downstream 2506780 96116 ~ 99195 (-)
G456609 NA other downstream 2566035 39518 ~ 39940 (-)
CI01000321_03044953_03048124 NA other upstream 377575 3044880 ~ 3048203 (-)
G458802 NA other upstream 477550 3088115 ~ 3091927 (-)
G458859 NA other upstream 861316 3471881 ~ 3489534 (-)
G458957 NA other upstream 1051061 3661626 ~ 3666999 (-)
CI01000321_03737149_03737996 TMEM238A other upstream 1125891 3736456 ~ 3738096 (-)

Expression


Co-expression Network