CI01000321_02627263_02629887


Basic Information

Item Value
gene id CI01000321_02627263_02629887
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2626614 ~ 2629925 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_02627263_02629887.mRNA
CTATATAATAACCAGAAATGTAGATGGTCACAGTGACGTAATGAAGAGGATGTAGGTGACATACATTTCTAAACACTTCTAAGAACTACTAATATAAATAAAATGTGGTTAAGCCTACAACTTATATGTGTAGAATGCAGAAGAGTAAGTCATGTAGTTGCACTGTAGTTAGAATAAAATAAAATAAAATAATAAAAAATAACCTGAGGGAACAAAATAATACATGCAAAGAAAAGCAGTCAACATACAAATAATTATAAAATAAAATAACCTGGGAGGAAAAAAAATCTCTTAAATCGGCAGTACAAATAATAATGTGGACGTAATAATTGTGTGTAACAATTGGGCTGAGAAAAAAACTAAAAGTAGATAATATTATATTCAAGTTTTTGCCATCTAGTTGAGAGGTTTAGCATGGCTCTGGTATTGAGTTATGACTCAGCACATTTGCATTTTGAGTCAATATCTGCTCTAATCCATCAACTGAAGTTTTGCTAACCAAATGACAAACCACACAAGGTTACGCTAATGTTTTGACTCAAGTAGCATCCAAATTTAACAAGGGACACATATCCTAGTGACAGAGCAACAGAAAACATTCAGTTCCTTTTAGCACCAAGGCACGGAAACAATCACTAAAATCTGTTGCATGCTCAAAAGCACCTTAGCCAAAAACCTAAAGCTACAAGAGGCCCAATCAATATCCAGGCATTGTCTATTTTCGTGCTCCGATGGACAGACTTTTAAATATCTACTCTCAGATATTCATTTTTCAGCCCAAGCCCAACCTGAGGAAGACCCGGGATGCTTTAGCTACAAAACTGTCATCCCAACCACACATAAATCAGTTTATACAGGGTCATCCCATCCCATCCCCCGTAAGTCCCACGGGGTGCCTGAGCCAATCAAAATGCGGGATAAGTACAAATTGTGCCCACTTATGGGATGTTTGAAGGTGTTATTCCGAGTTCTGCATAACGTTACATGCCAAGAATTGCATGCGCCTCCAAGTACTGTTTAAAAACGATATAATATTCTTTGTAGGGTTCCTTAATGGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_02627263_02629887.mRNA True 1059 mRNA 0.37 3 2626614 2629925

Neighbor

gene id symbol gene type direction distance location
CI01000321_02515869_02522379 NA coding upstream 104130 2515346 ~ 2522484 (+)
CI01000321_02508568_02513821 NA coding upstream 112707 2508568 ~ 2513907 (+)
CI01000321_02433523_02469055 NFATC1 coding upstream 157545 2433523 ~ 2469069 (+)
CI01000321_02371786_02421055 ATP9B coding upstream 204915 2371661 ~ 2421699 (+)
CI01000321_02359797_02366314 SALL3B, SALL3 coding upstream 260255 2359797 ~ 2366359 (+)
CI01000321_02720431_02722463 TRHRB coding downstream 90309 2720234 ~ 2723126 (+)
CI01000321_02771823_02809283 NA coding downstream 141337 2771262 ~ 2809420 (+)
CI01000321_02818757_02870940 PKHD1L1 coding downstream 188676 2818601 ~ 2871180 (+)
CI01000321_02880629_02932511 PKHD1L1 coding downstream 250133 2880058 ~ 2932742 (+)
CI01000321_02934935_02935222 NA coding downstream 304041 2933966 ~ 2935348 (+)
G457506 NA non-coding upstream 24005 2601863 ~ 2602609 (+)
G457495 NA non-coding upstream 78713 2547643 ~ 2547901 (+)
G457494 NA non-coding upstream 79219 2547131 ~ 2547395 (+)
G457478 NA non-coding upstream 133170 2493119 ~ 2493444 (+)
G457477 NA non-coding upstream 134061 2492219 ~ 2492553 (+)
G457554 NA non-coding downstream 37485 2667410 ~ 2667633 (+)
G457555 NA non-coding downstream 38346 2668271 ~ 2668782 (+)
G457556 NA non-coding downstream 39063 2668988 ~ 2669550 (+)
G457557 NA non-coding downstream 39805 2669730 ~ 2670162 (+)
G457637 NA non-coding downstream 210451 2840376 ~ 2841152 (+)
CI01000321_00815160_00819665 NA other upstream 1803767 815160 ~ 819749 (+)
G456774 NA other upstream 2199589 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 1159393 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 1376701 4013468 ~ 4015412 (+)
G459303 NA other downstream 1855472 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 1885609 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 2117487 4747650 ~ 4749579 (+)

Expression


Co-expression Network