CI01000321_02656580_02666438


Basic Information

Item Value
gene id CI01000321_02656580_02666438
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2656571 ~ 2666438 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_02656580_02666438.mRNA
ATGGACGTGCTGCAGGACTGGGCCCTAGCGTACCCGGCTCTGGCCCGGCTGCTCTGGGTGATTTTGCTGGTATTGGCCACCCTCCTGGTCTGGAGCTTGTTCTTCTGTTGCTGGGGTAACCAAAGCTCCACCTCCCCTCTGGAAAGATATCTCTCAGCTGTTTCCAGATTAGTAGAAATTCTAGAGTGTTTGAGGAAGAAAAAAGTTTTTACAGTGGAAACAGTATGCCGGTTTTTCATGACTGACTGCTTTCAGTGGGCAAAGGATGCCATAGAGAAACAGTCAAAGACAAAACACCAGAGCCAGGTCATGTCAGGGGGTCGCCGACGGATACTGGAGCGGTCTGCATCAGAGGAGAGTGCGAGTGACCTGAGCTCCTCAACTTTTCCCGGAGATACCTTACCATGGAACCTCGCTAAACACCAGCGCGTCAAACGCTCCAAATCTGCCTCCGGAGATGTCCTGGACCCCGCAGAAAGAGCGGTCATCCGCATTGCAGGTCTGCTTTTGACATTTTAAGCCAAGAAA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_02656580_02666438.mRNA True 528 mRNA 0.52 4 2656571 2666438

Neighbor

gene id symbol gene type direction distance location
CI01000321_02606321_02610175 NA coding downstream 46006 2605975 ~ 2610565 (-)
CI01000321_02563851_02571773 PLECA coding downstream 84798 2563851 ~ 2571773 (-)
CI01000321_02550520_02559309 PLECA, PLEC coding downstream 97262 2549992 ~ 2559309 (-)
CI01000321_02522945_02541898 EPPK1 coding downstream 112327 2522683 ~ 2544244 (-)
CI01000321_02502471_02505436 NA coding downstream 150853 2502262 ~ 2505718 (-)
CI01000321_02671166_02689684 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding upstream 4084 2670522 ~ 2689742 (-)
CI01000321_02702079_02702974 NA coding upstream 35421 2701859 ~ 2702974 (-)
CI01000321_02739755_02767802 NUDCD1 coding upstream 73044 2739482 ~ 2767968 (-)
CI01000321_03028470_03033496 NA coding upstream 361959 3028397 ~ 3034891 (-)
CI01000321_03044953_03048124 NA coding upstream 378442 3044880 ~ 3048203 (-)
G458661 NA non-coding downstream 121759 2534611 ~ 2534812 (-)
G458658 NA non-coding downstream 136816 2510245 ~ 2519755 (-)
CI01000321_02483521_02488846 NA non-coding downstream 166841 2483436 ~ 2491175 (-)
G458654 NA non-coding downstream 174873 2481114 ~ 2481698 (-)
G458587 NA non-coding downstream 233514 2420924 ~ 2423057 (-)
G458648 NA non-coding upstream 2051 2668489 ~ 2669532 (-)
G458651 NA non-coding upstream 3206 2669644 ~ 2670027 (-)
G458672 NA non-coding upstream 38963 2705401 ~ 2705656 (-)
G458682 NA non-coding upstream 48669 2715107 ~ 2715394 (-)
G458686 NA non-coding upstream 53700 2720138 ~ 2721446 (-)
CI01000321_02282824_02284376 MBPA other downstream 372060 2282238 ~ 2284934 (-)
CI01000321_01451689_01453423 NPY other downstream 1203264 1451194 ~ 1453530 (-)
G458122 NA other downstream 1620423 1032063 ~ 1036148 (-)
G456607 NA other downstream 2557376 96116 ~ 99195 (-)
G456609 NA other downstream 2616631 39518 ~ 39940 (-)
G458802 NA other upstream 421677 3088115 ~ 3091927 (-)
G458859 NA other upstream 805443 3471881 ~ 3489534 (-)
G458957 NA other upstream 995188 3661626 ~ 3666999 (-)
CI01000321_03737149_03737996 TMEM238A other upstream 1070018 3736456 ~ 3738096 (-)

Expression


Co-expression Network