CI01000321_02702079_02702974


Basic Information

Item Value
gene id CI01000321_02702079_02702974
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 2701859 ~ 2702974 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_02702079_02702974.mRNA
GGCCAGCATGCTATGAGATGAACATACGAATAGAAGTTCAAATGGCTGATCTTAAAGTCCTCTTTTGTGGTCAAGACGCTGTCCAGACCGATCACCTTGACTGGTCCCTAAAACACCAGCAAAGTCATCACTCAGTGTGCGCAGATGAAAGGGCCCTTTCCAACAAAGAGTGCTGCCAGGCGTATCTGGAGGAGAATGTTAATGAGGTGAACAGGCTTTCAGAACCATGGACAGCGACTCTGCCAATTGGACGACTCTGCAAACTCAATGAATGGGGATTCGATGAAGAAGTTGAGGTATGTTACGATGAGCAGTTTGAAACAGCTTTTCCAGGTGTGGCTGACATTACTGACCATAAAGACGGTCAGTTGTTAGAGGAGGAGACCAACTATGACAACTTCAGTTGGAATTCATCCAAAGATCTCCAAGATGGCGCCCCGGAATGCTCCCTTCTGTCAGTTGACGATTTCATGGTGGATTCATCGGAAAAGTCAGTGGATTATGGATTTATAGGCGCTGTTACCTTTTTAGTTACAGGGATCTCATTGGTTGTCATCTCCTACACAGTCCCACGTGATGTCAAAGTGAATCCCGACAGTGTTTCCGCCCGGGAGATGGAGCGCTTGGAGAGAGAGAACGCCCGAGTGGGTGCTCACTTGGACAGGTGTGTGATTGCAGGGCTGTGTCTCCTCACACTCGGAGGTGTGGTACTGTCAACCCTGTTGATGATCTCCATGTATAAAGGAGAGATGATCAGGAGACAAGCATTTGCTTACTCCAAGCACCAAGCCAGACTGTATGGCTCTATAAATTTCAGAAGTGGCGCGAGCCCGACCGCTGCTCCTTCGCTTTTGTCTCTTGATGAAGATGAAGGTCCTGTTGAAGTCTTGAGTTGAAGCCAAAAAACATATCTTGTCAGTTCTTCAAATGATCAAAACAGCTTTGTGATACTGTGATCTACTTCTAGACTCCTAAATTACTACTAAATTTGAGTCGAAAATATTTATATGACTGAATAAACTTGACTACATTGGGTCATATCAACAAAAGTCATTTTAAGGGTCCAAGCAGGTTGAAATTCTACACTTTTTACACTGTATGTAATGGACAATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_02702079_02702974.mRNA True 1116 mRNA 0.45 1 2701859 2702974

Neighbor

gene id symbol gene type direction distance location
CI01000321_02671166_02689684 EIF3E.L, EIF3EB, EIF3E, EIF3E.S, EIF3EA coding downstream 12117 2670522 ~ 2689742 (-)
CI01000321_02656580_02666438 NA coding downstream 35421 2656571 ~ 2666438 (-)
CI01000321_02606321_02610175 NA coding downstream 91294 2605975 ~ 2610565 (-)
CI01000321_02563851_02571773 PLECA coding downstream 130086 2563851 ~ 2571773 (-)
CI01000321_02550520_02559309 PLECA, PLEC coding downstream 142550 2549992 ~ 2559309 (-)
CI01000321_02739755_02767802 NUDCD1 coding upstream 36508 2739482 ~ 2767968 (-)
CI01000321_03028470_03033496 NA coding upstream 325423 3028397 ~ 3034891 (-)
CI01000321_03044953_03048124 NA coding upstream 341906 3044880 ~ 3048203 (-)
CI01000321_03067511_03106086 GRB10B, GRB10, GRB10A coding upstream 363766 3066740 ~ 3106086 (-)
CI01000321_03196013_03203541 NA coding upstream 492976 3195950 ~ 3203688 (-)
G458651 NA non-coding downstream 31832 2669644 ~ 2670027 (-)
G458648 NA non-coding downstream 32327 2668489 ~ 2669532 (-)
G458661 NA non-coding downstream 167047 2534611 ~ 2534812 (-)
G458658 NA non-coding downstream 182104 2510245 ~ 2519755 (-)
CI01000321_02483521_02488846 NA non-coding downstream 212129 2483436 ~ 2491175 (-)
G458672 NA non-coding upstream 2427 2705401 ~ 2705656 (-)
G458682 NA non-coding upstream 12133 2715107 ~ 2715394 (-)
G458686 NA non-coding upstream 17164 2720138 ~ 2721446 (-)
G458687 NA non-coding upstream 19062 2722036 ~ 2724689 (-)
G458752 NA non-coding upstream 184093 2887067 ~ 2890372 (-)
CI01000321_02282824_02284376 MBPA other downstream 417348 2282238 ~ 2284934 (-)
CI01000321_01451689_01453423 NPY other downstream 1248552 1451194 ~ 1453530 (-)
G458122 NA other downstream 1665711 1032063 ~ 1036148 (-)
G456607 NA other downstream 2602664 96116 ~ 99195 (-)
G456609 NA other downstream 2661919 39518 ~ 39940 (-)
G458802 NA other upstream 385141 3088115 ~ 3091927 (-)
G458859 NA other upstream 768907 3471881 ~ 3489534 (-)
G458957 NA other upstream 958652 3661626 ~ 3666999 (-)
CI01000321_03737149_03737996 TMEM238A other upstream 1033482 3736456 ~ 3738096 (-)

Expression


Co-expression Network