CI01000321_03324526_03332195


Basic Information

Item Value
gene id CI01000321_03324526_03332195
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3324526 ~ 3333862 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03324526_03332195.mRNA
ATGCTCTCACTAAAAAGTTTCAGTTTGGTTTGCAGACTTCAATCCCTGACAGCAAAGGACGAGCTGCCCAACATCGCCCTGCTGGCTTCAGGAGGAGGTGAAAGAGCAATGGTGGGTTTGCTGGGATCACTGGTCGCACTGTCTAAAAGTGATCTGTTGGACTGCATGCTGTATCTTGCCGGGATTTCTGGATCTACCTGGTGCATGGCGTCTTTATACAAAGAACCAAATTGGTCCAGCAACCTAGAAGCAGTGAAGGATGACTTTGTACAAAAACTTCTTCAGCCTGACATCAGTTTCAAGAAGAAATTGTTGACACTCAAAAAATACTACAGACAAAAAGACAATTTCAGTCTGACCGACATCTGGGCAGTGCTAGTTTTAAGCAAGATTGTTAAGAAGATAGATGAGAGTACTTTAACCAGTCTAAGGAGCCAACACAGCAAAGATCCTTATCCCATCTACACCGTGATTGATATCCAGAGCAGATTTGATAAACTAGAAGCAGAGAAATTTGTTGAGATCACGCCACATGAGACTGGCTACTCCATCCCTGGGGTCTTTGTAGATACTTCCTGTTTCGGAAGTCATTTTGACCAAGGGGTTAAAATAAACGACCAGCCCGAGGTGGACATGCTGTTTCTGCAAGGTCTGTGTGGTAGTGTTCTTGCTGACCTAGAACAAATACTGGAGGAACTGTTACCTTTTACCAAAAGAAAGTTGGACAAAGAAAAAAATGAGAAATTAATCACCATGTCAAAAGAAATGAATAAGAAAGACATTAAGGAATACACACTATATATATGCAGCCTTCATTCATGCTGGAATCTGACATGCAACGAGATATGGGCTGTGATTGTTAAATGCATTGAGTTAGTTACTCACTGGATCTGGGGCACAACATACAACTTTCTGTACAACATGACAGCAGAGGAGGTGTCTCCCTCTATTCTTAAAGAGGAAAAGAGGCATTATGTTGATGCTGGGATTGACATCAACTCACCATTTTTGCCAGTGCTGAGGAAAGAGAGACACATAGACATCATTCTGTCCCTCGATTTCAGTAAGACAGACCCATTCAAGTCATTGATAAAAATCGTAGACATGTGCAAAGATCTACACATTGATTTCCCTGAAGTCCCAAATGACTTAGAAGATGAGAGAGATGATCCAAAGGACTTTTATGTGTTTGAAGGCCCCAATGCACCGACTGTAATTCATATTCCTCTTTTCAACAAGACGAATTGTGGTGATAAAGAAGAAATTGGAAAGTGGAGGGAAACATATAAAACCTTCCAACTCCCCTACGACAGTAAAATGATCTATGACCTACTGGAGAAAGCTGGAATGAACATCAAAGATAACAAAGAGAAGCTTCTGACAGAGATTCAGAAAGTCATCAAACGGAAGACATCATAATTTCGTTCCATTTATTGATTCTCAGGTGTGGCTTGTCACATCACAATGGAAATTCACTGGCTTTTCTATAGTTCTTGTCCCTGAAGGCCGGAACACACCAAGCCGACGCCGACGAACTAGTGGTGATGAAAACAGACTGCGGGGTTGGCTCACGTCGGCAGCGTCTGTGTCCAAAGTTGCCCTGACACACCAAACCGACGCTCGACACCTGACGGCCAAGTAACACGTCCGTTCTGCGCCTGCGCAAGATGAAATGCCTTTCCGTACCAGCAGGTGGCAGTAGCTGAACAGCCAATCAGAATGATCAGATGGCCCGATGGACCGACGAGCGCCGACACCGACGCCGATTCAACATTTCGAATCGGCCGAAAAAAAAACTACGAGGACCAACTTCAGCCGACGGTGCAGAACACACTGAGAAAACTTATGGTGCGTTCACACCAGACGCGAATGAAGCGCTAAGCGCGAGTGATTTACATGTTAAGTCAATGCAAAGACTCGAATAGACATCCTGCGGCGCGAATAGAGCGTTTCAGGCGTTTGACGCGAGTAACGCGTGATTCGCGCGAATCGCGCGAGTTGAAAAATCTGAACTGAAATTCGCGCCGCGTTAACCAATCAGGAGCTTGCTCTGGTAGTGACGACGTAGCGTGAGGAGGCAGAAATCCGAAACAACATGGAGGACAAAATCATCCTCGCTGTACGATACATCTTTGTACTTTTTTAGAAACAGGAATAAAAAGGATTTTGCTTGGAAGAAAGTGAGTGAGGAGGTCGGACAATCTGGTAAGTTGTAAAAAACGCTCTTTACTCAATTTGAGCTAGATATACACATATTGAGACTACAAGCTAGCTAAAGCCGGCAAATTGAGCTTATTCGCCGTATTTTACAACTACTTTCCCGCTGCCGAGTTGATGTGTTTATTCAGAGGAAGTGTGCAGAAACGAGACGAGACGCCTGGCAGAAGCCCCTCTCATGACGCGAATTCGAGTCTGTTGTGAAGTGAATTTCACGCGCAAAGTGAAATTCACTTTGCGCGTGAATAGCGCGATTTATTCGCGCAAGTCGCGTCTGGTGTGAACGTCCGACGAACAAAAACTGCCCGACGGCCAACCGTCGGCTTGGTGTGTTCAGGCCTTTAGGTGGCAGCAAAGAAGAGGCGATTAGAAAGGGTGAGAGGGTTTGTTTCAGCTGTCCAATGTGAGAGAATGATAGAGACATAAACATTAGGCATATAAAAACATTTTGTGAAACATTCAAGTGAAATAGAATTGCATTTGTTGTTAATTTTGTTAATAGGTAAATAGGCTTGCAAGTTTTTAGTCTCTTACCTCTGAAATCTGTTACTGACTTCTAACATTCAGGTTCCTTTAAAAGAGTCTCTCCCACACCGTTTGGAATGAAACATGATGCAACAGACTTTAGACTGTTAACTGACAGCAGACAACACACACACACACACACACACACACACACACACACCTAAAACATTATAAGTTGTAACTTTTTTATATAATTACAGTTTTATTTTCACATGTCCTTCAGTTCCTCACCTGCATTTCTGTAAAGTCATCACAGACTAGTGCATCAGAATCAAACAAAGAATTTTTGAAATATTTTTTGTTGTTGTTTTTATATTAGTTGACTTGTTTATTATCATCTTTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03324526_03332195.mRNA True 3086 mRNA 0.43 11 3324526 3333862

Neighbor

gene id symbol gene type direction distance location
CI01000321_03303567_03306121 XTM4 coding upstream 18405 3303278 ~ 3306121 (+)
CI01000321_03294654_03298670 NA coding upstream 25725 3294470 ~ 3298801 (+)
CI01000321_03258454_03289329 ARHGEF1A, ARHGEF2 coding upstream 35093 3258322 ~ 3289433 (+)
CI01000321_03245667_03250403 NA coding upstream 72969 3245667 ~ 3251557 (+)
CI01000321_03212011_03226326 NA coding upstream 98127 3211861 ~ 3226399 (+)
CI01000321_03348458_03349276 NA coding downstream 14512 3348374 ~ 3349487 (+)
CI01000321_03351289_03352346 NA coding downstream 17122 3350984 ~ 3352677 (+)
CI01000321_03361065_03369574 PIP5K1AA coding downstream 27203 3361065 ~ 3369574 (+)
CI01000321_03375884_03385622 PSMD4, PSMD4A, PSMD4.L coding downstream 39571 3373433 ~ 3385854 (+)
CI01000321_03472129_03487677 SLC9A3.2 coding downstream 137378 3471240 ~ 3487947 (+)
G457773 NA non-coding upstream 4432 3319568 ~ 3320094 (+)
G457772 NA non-coding upstream 31148 3293130 ~ 3293378 (+)
G457771 NA non-coding upstream 31398 3292907 ~ 3293128 (+)
G457766 NA non-coding upstream 119405 3204735 ~ 3205121 (+)
G457765 NA non-coding upstream 120920 3201738 ~ 3203606 (+)
G457775 NA non-coding downstream 6658 3340520 ~ 3340744 (+)
G457780 NA non-coding downstream 50571 3384433 ~ 3448259 (+)
G457726 NA non-coding downstream 67568 3401430 ~ 3403897 (+)
G457732 NA non-coding downstream 81386 3415248 ~ 3423378 (+)
CI01000321_00815160_00819665 NA other upstream 2501679 815160 ~ 819749 (+)
G456774 NA other upstream 2897501 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 455456 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 672764 4013468 ~ 4015412 (+)
G459303 NA other downstream 1151535 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 1181672 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 1413550 4747650 ~ 4749579 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_014606 LO018584.1 coding NC_007130.7 CM002903.2 10955337 ~ 10971230 (-)