CI01000321_03348458_03349276


Basic Information

Item Value
gene id CI01000321_03348458_03349276
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3348374 ~ 3349487 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03348458_03349276.mRNA
CTTTAAATATGGATGAGGCCTCATAACCCATCACAGTTCAGGCACTGACAGGCTCAAATCTTTCACTTCAGGACATAAACTGCTATGGAAATGAAAACTACACTCAGCATCATTATAATTCTTCAGCTAACTTTAGGAGCCAAACCATCACTGGAAAACCTCAGAGCCATCTGTGTCCATGGAAATGGCCGTCCAAGATATCCTGCCAGTGTCATCCCATCTTCACATTATGGATATTTTCACCGTGCGGCAGCTGCAGTAAACAGAGCAGAAGCATGGTTTAGTCAGTGCTGCCAGAGAGGTGTGACTCAAGGATGCCAGCAGATCGTTTGCTGCGCCAAACAGGCGTGGGAAACTGCTTTGTCCCTTTTCTGTACTGAGGAGTACTCCACCATGACTTTGGTCCATGAGTGCTGCGAGAAGAAGGGAGAAGAAAGGTGGAACTGCTTTGAAAATCAGGCTCCTAACCCCTCCTACCAACCCCTGTCTGGTTACAGAGCCCCCATAATACCACCTGATAGGATTTTCATCTGGGACCCCAACACCTGTTAAATCTCTTAATGCCATATGACAACCTGAACAATTTTATTTGATTTAACAGCAACAAAACCTGTCAATTAATCAACTGTGAAGAGTCAGAATATAACATGCTTTTCAAGTAAATTAAACATGCTCAGAGTTCTAGAAGAGCTGAAATATAACCCTGTGCATCAATTTATTTATCTTCACACGTATTATTGTATGCCATAGAAAAACATGCAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03348458_03349276.mRNA True 763 mRNA 0.43 3 3348374 3349487

Neighbor

gene id symbol gene type direction distance location
CI01000321_03324526_03332195 NA coding upstream 14512 3324526 ~ 3333862 (+)
CI01000321_03303567_03306121 XTM4 coding upstream 42253 3303278 ~ 3306121 (+)
CI01000321_03294654_03298670 NA coding upstream 49573 3294470 ~ 3298801 (+)
CI01000321_03258454_03289329 ARHGEF1A, ARHGEF2 coding upstream 58941 3258322 ~ 3289433 (+)
CI01000321_03245667_03250403 NA coding upstream 96817 3245667 ~ 3251557 (+)
CI01000321_03351289_03352346 NA coding downstream 1497 3350984 ~ 3352677 (+)
CI01000321_03361065_03369574 PIP5K1AA coding downstream 11578 3361065 ~ 3369574 (+)
CI01000321_03375884_03385622 PSMD4, PSMD4A, PSMD4.L coding downstream 23946 3373433 ~ 3385854 (+)
CI01000321_03472129_03487677 SLC9A3.2 coding downstream 121753 3471240 ~ 3487947 (+)
CI01000321_03490261_03505373 SLC9A3.1 coding downstream 139600 3489087 ~ 3505473 (+)
G457775 NA non-coding upstream 7630 3340520 ~ 3340744 (+)
G457773 NA non-coding upstream 28280 3319568 ~ 3320094 (+)
G457772 NA non-coding upstream 54996 3293130 ~ 3293378 (+)
G457771 NA non-coding upstream 55246 3292907 ~ 3293128 (+)
G457766 NA non-coding upstream 143253 3204735 ~ 3205121 (+)
G457780 NA non-coding downstream 34946 3384433 ~ 3448259 (+)
G457726 NA non-coding downstream 51943 3401430 ~ 3403897 (+)
G457732 NA non-coding downstream 65761 3415248 ~ 3423378 (+)
G457797 NA non-coding downstream 158482 3507969 ~ 3572127 (+)
CI01000321_00815160_00819665 NA other upstream 2525527 815160 ~ 819749 (+)
G456774 NA other upstream 2921349 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 439831 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 657139 4013468 ~ 4015412 (+)
G459303 NA other downstream 1135910 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 1166047 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 1397925 4747650 ~ 4749579 (+)

Expression


Co-expression Network