CI01000321_03389183_03396898


Basic Information

Item Value
gene id CI01000321_03389183_03396898
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3389183 ~ 3396898 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03389183_03396898.mRNA
GCATTTTATGAGAACTTTTCAAATCAGATCAACCATTTGGGTACCATGGATGGCGAGTTACCACCATGGAATAAACATGGAAGCCATAACAGCAGGGTTCCCTATAATATATCAGGGGAACATCAGGAGGTAAGTTACAGTAATTATATTTCTGTACATTATGATAAAGTAATGACTGAGGGAAATTATGGAGAAAGAGCAGAAGAGTTCTCTCACAGTAACTGGCTCCAAACACAGCCAAAGGATAATGACTTGATAGGAGACAGCTTTGCAGCGGGAGAACCCGTGTCATCGCTGTCATCTTGTATGAGTGGTGCATTTAAAGCTTTGTTACCAGATTACCATGGAACTTCCTCAGAAATGACGACAAATTCTGTTAAATATTCATATTCTCCCAATAATCATTGTCTCATCAAACCTGGTGCTGCAGTGGATGATAAGATAGTGGAGAGAAGGGAAAAAAGCGATTTTCTGAAAGACCCTTTGTGTGAAGCATCAGCTAGTGTCACACATTTGCTTCCACCCAGATGTGCCCAATATGTGCCACAAGAAAAGGACCAAGGAAACTGTAATTGGACGTCCGTGATCAAAGATGCTCTAGAGATGAGTAATGGAATGGAAATGGAACCGACTTTATCCATGGATGTATGTGGCCCCTTAATAGACTTCAATGCTGTATATAAAGGACCTGAAACTGAGGCAAAATTTACATTAAGAGATGACTATCAGATAGCAGGATCCAAACTAAATGAGAGACAGGATGGGCAAGGAATGAAAGAAGAACCGGATTCCTTTATTTCAATGTTGTCAGATGGCATCAGTAAAAAGAAAGATGTTCTGGAAATGGGGGAAAGTGATGAGCCAAGCGTATTAGCTGTAGGATCATCTCTAGGAAAGGAGGAACTTGGAATGACTGGATTCAGAGAAAATGAGCCAGGGTTATTATCAGGATTTAATAGGAGTTCATACACTCCTTTTTCTTCTTCAGAAGGTTTTGTGAAAAGTGAAAAGTTCCCAGGTATTCCTTCGGTCAAGCAGTCTGTTGAACACACCCTCCAAGGAATCACACAAGGATCCGAGTCGTGCAAAGATGTCAGTCCAGAAAAAACTGCGGGCACAGATATTTGCTTCAAACATGCAACAGGAAACAATAAAACTGTTCCTGAAGGATCTAATCTATATGGTTTTCATCATCTTGATCTTCAAAAGGACTGTCACCAAGCAGAGATTACAGATGGAAACACTTCAATTAATTACCAGGATCATTCCTTACAGCATGATGTGCAAGACAAGAAGGTAAACACAAGCAATCTGCATGTCTCTGAGTCTAAAACAAATAATGCTGAAATCAGTCTAAAGATGGAAACAGAATCTGCCCCTGAAATTAATAACTCTACTTTAGGGTCAGAGACAGTTCCAGATCAAACGGTTGTATCCAACAAAATTCATCTCGATTATAAATGTAAGGATTCTCCGATAGAACCAGGGGAAAGTGGCAAATTAAATCCAAGTACAGTTCTTCTGCCTTGTGATGAAAAGGTACAAAACTCTGAAAAAAATGAAAACACATTTCTCAACATTACTTCAGAAAGCAGTATTCCTCCAACTACTGAGAATGTTCATGCAGCTCCACCTTCTCCCACTTCAAGGATCGATTGCTCCTCTCAGCCTAACCTACAGAAAGCATTGCAAAAGTGTAAGAAATCAAGAAAAAGAAGAAAATCTGAACTTGAGAAATTAAATGGACCAATACACAAGTCTAATAAAAGAGATTGTTCTGTGTATGGCACAGGAATCTGTGCTGTCAAACCGGACACAACTGGAAGTGAAGAAACTAATCAAGACTTTTCATTGACTAAAAATGACAGTACTGCAATGAAAGAAGAGGACTTAATTACAAATGGTGTAAACCCACCTTCACCTAGAAATAAATTACTATGTCATTCACAACTGCGGATGACACAACTTGAACTAGTGGAAGATACAGCAGAGACCTCACGAAAACCAGATCATAGCTGCTCTGAAACCTCTCAGGTAAAAGCATCTTCAACCGCTAGGATCGACAAGAAGGCTGTTTCTAGAAGGAAACAGAAGAACAGAACAAGGTTACATTTAGAAGCAAAAAAATCTGCTAGATTTAGCAATCAGTGTTTGTCTCAAAGCACTGTCTTGTCCTCAGAAGAGGACTGTACGTCACATTTTCAGGTCAGTGACGCCACCCAGGTGAAAGAAGTCAGTAACCCAGCAATAATCCAACAGGCCATCTCTGGATTAGAGTCCAGTATTCCTGAGTGCAGTCCAAAAAAATCTACAAAAAAGAAAACATTGCAAACAGAAAAATATGCTCTACTAACACTACAAAGCAAAGGTGATCCGCATGATGATCTCACAACATTTTCAGAAGTTGAGGCAGACTTAATGGACTTCAAGAAGCATCAGAAAGTGAGAAGACCTGGTATAAAAGCTTCTAAAGGCAAAAATGACAAGCATGCAACTAGTCTGCTCAATAGTCAGCCTTTACTAGAGTCTGTGAGTCAAACAGATTCTGTTTCAACCTCAGTGACTGAATCTTCAAACATTCTAAGCCCTCAGAAAAACCCAAAGAAATCAAGGCAAAAGAAAAGAGCAGATATCAAAAAGGCATCAAAATCCCCACAAGAGAATATTCCCTTACCGTTATCCAAATCTAAGGAAAACATGGTGATTTCCAACACAAGGACTATGACAGAAAAAAGATCTGTAAAGAAAGCTATTAGAACAGATGACTGTGACACTACTCTTTTGGACTTACAACCTTCTACAGCCACTCAGGAGCAAAAAGATTCTGCTCCAACTGCGGAAACGGAAGCTGAGTCACCAATTGTTTTCAGCACACCAAGGAAGTCGGTGAAAAAGAAATTGTCAAATATTAAACGTAAAGCAGTACATATACCTGCAGTTGACCAAACAAAAGCTCAAAGTGTTTTGAATCCACTCTCAGAATCTGATGCCAGCATTGTGCAACCAACTATAAGAAGGTTCAGCACAAGAAAAACACTTGACAAATTTGTTTCTCATAACACAGTCAGTGAGAACTGTGAATCTGTTCATTTGAATCAGTCAGTTTCTTCAGATGATTCTGTGTCTGCTACAGTAACTGAGTTTTCAGGTTTCAGCCAAAAGAACACAGAAAAAACATCAAGTAAAAGGAGAAAGACAAATATCAAATTTATGGAGGCACAAACATCCACTACTAGCCAAAAGAAAGATGTTCCTGTACTGCCTTCAGAAGACTTTGCATCGATTGTGGTTTCGAATCCAGAAAAGATTGTGAAAGTCAAAAAACTTTCTAGAAACAAAACAAATGACAACCACTTAAATGATCATTTGGTTGAAGACACATCTTTATTAGCATTTGTGACACAAGAAAATTCTATTTCACCTTCAAAGATTGACTCTTCAAGCAGTTTTAGACAAACCAACACACTGAAAAAGCCAAGAAAAAAGACTGCGACCAAAATCAAAAATGAGGCAGAAGAAATACTCGGTGTAAACCAGCATGAAGATTTGGTTGCAGTAACCTCAAAACCTAGTGCAAACATAGTGGCCTCCAGTTCACAGATGACTTTAAAAGAAGAAAGACTTGTGGAAAAGGCAATTACAGAGGAAGTGAAGGACAACCACGCAACTGCTCTTTTTGTCATGCAGACTTCTACAGCCACTTTGCAGCACGCTGAATGTGTTTCAACTTCATTTGCTCACAGCACACCAAAAAAATCTAAGAAAATGTCTGACATTCAAGGTGGAGTACTACATACACCTGCAGTTGACCAGTCAATGCAACAAGAACTCCATCCATTTGATTCTTCATCAACAACAGAAATTGATAATGTCCTAAACCAAAAGAAGATAAAAGTGAAGACGAAAAGACAGAGTAAAAAGTTCACTAAACGCAAAACACATGTTACCCAAGCAATCAGCAGTATTAGAGAACAGTCTTTTCCAGCTACTGTGCAGCATGAAAATTCAGTTTCAAACAGAAACACAAATTCAAGGTCTGAAGAAATGGCACAGAAACATAAGAAAAAGAAAACATCAGCACTAAAAGTTCGAAATTCTCAACCAGAGGACTATGCTGAACATTCTACGATTTTGCCAGCACTTTTGCCTCCACCAATATCTCTGGGTAAGGATGCAACACAAGACCCTTGCATAAAAACAGATGCTGTGAAAGAATCAGCTGAAAGTCATGTTGAAAACCAGGATTTCATCACTACTGAAGCTGTCGCATGTTCTCAGAGCTTGCTGAAGAAGGCAAAGAAAACAAAAGGGAAACAATTGCTAGTGCAAAAAGAAGTTAATGAACAAAGCAAGATCCTAGAGCTGGCACACAGAGAGAACAAAATGTCAGATGCGCCATCTGTTGTGCGGGAGGTAGCTTCTGAGAATTTTGAAACGTTAGAAGCAGACAGCTGTGACCAGCATTTGAAGGTTGCTAAGAAGAAAGCCAAAAAATCCAAGCAAATTGCAGAAACGCATGAATTTGCTAATGTTTCTTTGTCTCAAGAGAAAAACACTGGATCAGATGAGGCAGGTGTCATGGTCACCTTTACACAGATCCAAGATTTCTGTGAACCACCTGATGGTCAGACTGTAGGATCACCGCAGCCTGAAAAAGATGGTGATGTGGTTAATCAGAAAGATGTAATCAAGGAAGAGAGTAGAATTAAAGACCTCAAAACCACAAAAACCCCTAAAACAAAGAGTAGAAAAGCTGGACGAAAGAAGAGGAAGATAGCAGGCCTGTTAACTCAAACAGTTAAAGAAGAGGAACATAAAGATATATCTTATGATAACAGAATTGCCTGTGATTTTCAAAACAACACACAAATTCAAATTTCTGATAGCTCACAGAGGACAGCAGTTATTCCAGAGGAATCCGTAACGAAATCAAGAAAATCAACCCGCACACAAAAAACTAACTTGGGTTTATTTGTTGAAAATGTGTCAACCCAGGGTTCTTTAGACATCACTGAGTGTCATACAAGGCTTGGAGAGACTCTTTACAGTTCCATGCAGCCTGCTGATTGTGAAAACCAATACACTGTTGAGGAAAAGTCACCAAGACGAGGAAGACCGCCTTCAATTAAAAGCAAGGAACAGAAGTTACCGATAGCACATTTAGAAGATAACGCCTCTCCATCTGTCCAGATCTCAGATCTCTCTTCATGTGAGGACAACGCAAAGACTCTTTCCAGTTCCATGCAACCTTCTTATTGTGAAGACCAGTACACTGTTAAGCAAAAGTCACCAAGACGAGGAAGACCGCCTTCACTTAAAAGCAAGGAACAGAAGTTACCTATACCACATTTAGAAGATAACTCCTCTCCATCTGTCCAGATCTCAGATCTCACTTCATGTCCGGACAGCACAGAGACTCTTTCCAGTTCCATGCAACCTGCTGAATGTGAAGACCAGTACACTGTTCAGCAAAAGTCAACAAGACGTGGAAGACCCCCCTCAATTAAAAGCAAGAAACAGAAGTCATCAATAGCACATTTAGAAGATAATACCTCTCCATCTATTCAGATGTCTGATTTCTCTTCATGTCCAGACAGCACAGAGACTCTTTCCAGTTCCATGCAACCTGCTGATTGTGAAGGCCAGCACACTAAGCAAAAGTCATCAAGACGAGGAGGACCCTCCTTAATTAAAAGCAAGAAACGGAAGTTATCTATAGCACATTTAGAAGATAACACCTCTCCATCTGTCCAGATCTCCGATCTCTCTTCATGTCAGGACAGCACAGAGACTCTTTCCAATTCCATCCAACTTGCTGATTGTGAAGGCCAGTACACTGTTAAGCAAAAGTCACCAAGACGAGGAAGACCCCCCTCAAATAAAATCAAGAAACAGAAGTTATCTATAGCACATTTGGAAGATAATACCTCTCCATCTATCCGGATTTCTGATCTCTCTTCATGTCCAGACAGCACAGAGACTCTTTCCAGTTCCTTGCAACCTGCTGAATGTGAAGGCCAGTACACTGTTAAGCAAAAGTCACCAAAACGAGGAAGACCCTCCTCAATTAAAAGCAAGAAACGGAAGTTATCTATAGGACATTTAGAAGATAACACCTCTCCATCTGTTCAGATCTCAGATCTCTCTTCATGTCAGGACAGCACAGAGACTCTTTCCAGTTCCATGCAAATTGCTGATTGTGAAGACCAGTACACTGTTAAGCAAAAGTCACCAAGACGAGGAAGACCCCCTTCAATTAAAAACAAGAAAAAGAAGTTATCTATTGCCCATTTGGAAGATAACACCTCTCCATCTGTCCAGATCTCAGATCTATCTTTATGTCAGGACAGCACAGAAAATACTGTCAAAGCAGCTGCAAGTCCAGCGAAGCAGAAAGTTGTCCAACCCCTTAAAAAGAGAAAGGTTATTAAAGTGGATAATGTAATGGTTACCAAACAATTGGGGGCTGATCCCTCAGAATCCCTTCAGAGTGTTACTGATGACTTGTCACACAACATCCCTGCACTTAAGCATAAAAAAGGGAAGAACTTTAAAAGACTTAAGTTATCAAGCTTGAGAGTGTCCAGCAGAACATCTGAACCATCAGTCAAAGGTTTTCAGAAAGCAGATATACATTCCCTCCCTCAAAATTTCACAAACGATTTCAATGAGAAAGGGGAAACATCTTTGCCTATGCCTGGAACAGTGAAGAAACAAGATGGAGATGTCCTGGCAGATATAAAGATTGAGAATAAGGCAACGGTTAAAGTAGTTAAAGGAGGAAAACGTGGTCGGAAAAGACGAAAAATTAAAGAACCACACCGTGACCTTGTAACTGAACATGAAGAGCTTCAAAGATTATCAACAAAAGCCAAAAATAACAAAATACAAGATTGTTCTGAACCAGCTAAAAGTTTACTCACAAAGTTTAGTATAACTAATGAATGCTCCACTGAGGAACAAAATAGTATAGTTTCATCAGAGAAAAATGATAATGAGAAAACCAAGCTAAGCAGTGTTGAAATGCTCCCAGCAATAACTGTAGGGACCTGTCAGATAACGCCAAAAACAGAGGTCCTATGCAGTTCTTCCACTCAGCTGTCCTCCAATTTAATGAAAGAAGTCAAGAAGTACAAAGAACACGATGCTGAGCCAAATGGAAATGATTTATTTGCGGTTATTGATAATACAGGACTCTCTGGTGGAGTCTCTAGTGGAATTTGTAACTTAATTTCTAGCAGTGTGGTCAAAAAGGAGTCAGAACACATTGAGCTGAAATGTACTCAGGAAACAGATGGACTAGGTGTGAAAATGTCAGGGGAAAAAATACCTGACAACTCATCTGAGATAGAAAATGCATTTCAAACATCTACAGAACAGAAAGTGGATGGCTTCACACAGGATAGTGAGGAATGTGTTGTAATGCCAAACAAG

Function

NR:

description
uncharacterized protein si:ch73-347e22.4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03389183_03396898.mRNA True 7434 mRNA 0.40 4 3389183 3396898

Neighbor

gene id symbol gene type direction distance location
CI01000321_03386687_03389140 NA coding downstream 43 3386045 ~ 3389140 (-)
CI01000321_03334483_03334797 NA coding downstream 54386 3334118 ~ 3334797 (-)
CI01000321_03319309_03319938 NA coding downstream 67848 3318603 ~ 3321335 (-)
CI01000321_03196013_03203541 NA coding downstream 185495 3195950 ~ 3203688 (-)
CI01000321_03067511_03106086 GRB10B, GRB10, GRB10A coding downstream 283097 3066740 ~ 3106086 (-)
CI01000321_03401671_03403757 APOE coding upstream 4618 3401516 ~ 3403802 (-)
CI01000321_03410703_03411704 APOA4A coding upstream 13682 3410580 ~ 3413703 (-)
CI01000321_03415680_03424668 TOMM40, TOMM40L coding upstream 18321 3415219 ~ 3424779 (-)
CI01000321_03426560_03434271 DDX6, DDX61 coding upstream 29253 3426151 ~ 3434782 (-)
CI01000321_03440258_03454448 LIPEA coding upstream 43100 3439998 ~ 3454560 (-)
G458891 NA non-coding downstream 45475 3343430 ~ 3343708 (-)
G458888 NA non-coding downstream 48647 3340241 ~ 3340536 (-)
G458870 NA non-coding downstream 156507 3232474 ~ 3232676 (-)
G458841 NA non-coding downstream 204887 3184071 ~ 3184296 (-)
G458840 NA non-coding downstream 205256 3183660 ~ 3183927 (-)
G458901 NA non-coding upstream 60929 3457827 ~ 3458328 (-)
G458902 NA non-coding upstream 66573 3463471 ~ 3463686 (-)
G458903 NA non-coding upstream 68677 3465575 ~ 3465864 (-)
G458905 NA non-coding upstream 71953 3468851 ~ 3469122 (-)
G458916 NA non-coding upstream 202591 3599489 ~ 3599969 (-)
G458802 NA other downstream 297256 3088115 ~ 3091927 (-)
CI01000321_03044953_03048124 NA other downstream 340980 3044880 ~ 3048203 (-)
CI01000321_02282824_02284376 MBPA other downstream 1104672 2282238 ~ 2284934 (-)
CI01000321_01451689_01453423 NPY other downstream 1935876 1451194 ~ 1453530 (-)
G458122 NA other downstream 2353035 1032063 ~ 1036148 (-)
G458859 NA other upstream 74983 3471881 ~ 3489534 (-)
G458957 NA other upstream 264728 3661626 ~ 3666999 (-)
CI01000321_03737149_03737996 TMEM238A other upstream 339558 3736456 ~ 3738096 (-)
G459011 NA other upstream 413229 3810127 ~ 3816395 (-)
G459803 NA other upstream 1622068 5018966 ~ 5025886 (-)

Expression


Co-expression Network