CI01000321_03674424_03676748


Basic Information

Item Value
gene id CI01000321_03674424_03676748
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3674424 ~ 3677004 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03674424_03676748.mRNA
TGTCACTTGACTGCACCTTTCTCCTCATCTTCTTGATGACTTGCGTTGAGCTCTTCGTCACAGCTCGTCCCACTAATATACCACAAGGAAAAAACGGTCTGCAGATGCTGCAACAAGAAATGCGTACGCTATTCAAAATAGTATCTGAAGAAAAGCAAAGGAATAAGTTGTACGACTTTGAACAATCGCTCACATCCCTGCCCCCGTTGAACTTCAGCACAGAAGACCTGAAATCACTCGAGATGAGCAGTACCTTAGCACAGCTGTACTCTGGTCTTAAATCCTTCAAGTTCCATCTTGACTGGATCCAGCAGAAAGAAGACGAAATGGGGAATGATTATTCTATGACAAAGAAGATCGCTCATCATATCCAAACCATTAGCCACAAGGTGCTCACACAGACAGCCTGGAGCTTGTTCCAGGCCAAAGTGGAGATCCACGAGAAACTGTACCACTTTTGCAACTGGTACTTTAGAGCACTGGCAGTCCTGAGACACAGACAACAGTGATCATACAACATCATATGACACCAGTAGCCCTCAGGTGAGGTCAACAGGCATCGTGGTAGCATCATCTGACTTGCCTTAATGTTTGAAGGGATGGAATGAATGTTCCAGCCTTTGTAAGTCATCTTCCATTTTGACAGTCCATCAGTTAACATTTCCTATGTGTGATGTTGTTTTTTAATATTATTAATAAGTTATGTATTTAATATTTATTGAATTGAGTTCTATGTTTACAATGAAGGATTTTTTTATACATCGA

Function

NR:

description
interleukin-11

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03674424_03676748.mRNA True 765 mRNA 0.41 4 3674424 3677004

Neighbor

gene id symbol gene type direction distance location
CI01000321_03650761_03655489 NA coding upstream 18915 3649366 ~ 3655509 (+)
CI01000321_03597314_03599713 LIM2, LIM2.4, MGC84384, LIM2.L, LIM2.5 coding upstream 74462 3596346 ~ 3599962 (+)
CI01000321_03561216_03562202 NA coding upstream 112132 3558614 ~ 3562292 (+)
CI01000321_03550354_03554714 NA coding upstream 119122 3550022 ~ 3555302 (+)
CI01000321_03532268_03545406 TEKT2 coding upstream 126865 3531993 ~ 3547559 (+)
CI01000321_03680978_03683234 SBK2 coding downstream 3974 3680978 ~ 3683679 (+)
CI01000321_03702229_03709660 NA coding downstream 25084 3702088 ~ 3709808 (+)
CI01000321_03714795_03718845 NA coding downstream 37472 3714476 ~ 3719085 (+)
CI01000321_03739229_03740955 NA coding downstream 62225 3739229 ~ 3740990 (+)
CI01000321_03749658_03759359 U2AF2.S, U2AF2, U2AF2A, U2AF2B coding downstream 72654 3749658 ~ 3759645 (+)
G457842 NA non-coding upstream 38944 3631777 ~ 3635480 (+)
G457797 NA non-coding upstream 102297 3507969 ~ 3572127 (+)
G457780 NA non-coding upstream 226165 3384433 ~ 3448259 (+)
G457859 NA non-coding downstream 15877 3692881 ~ 3696205 (+)
G457872 NA non-coding downstream 45745 3722749 ~ 3732110 (+)
G457874 NA non-coding downstream 59442 3736446 ~ 3738593 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 non-coding downstream 126002 3792915 ~ 3805511 (+)
G457878 NA non-coding downstream 161303 3838307 ~ 3838532 (+)
CI01000321_00815160_00819665 NA other upstream 2851577 815160 ~ 819749 (+)
G456774 NA other upstream 3247399 426083 ~ 427025 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 329622 4013468 ~ 4015412 (+)
G459303 NA other downstream 808393 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 838530 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 1070408 4747650 ~ 4749579 (+)

Expression


Co-expression Network