CI01000321_03811184_03815473 (ZNF865)


Basic Information

Item Value
gene id CI01000321_03811184_03815473
gene name ZNF865
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3810295 ~ 3815631 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03811184_03815473.mRNA
CTTTAAATGAGGACATTTCTGAGGAAATCACAAAGTGGGACCATTTTATTTAGAACTTGTCAAAGGAATACACCAATATCAAGACAGGCAGACATTCCCTCATCGCTTCACTTTTAAATGGCTTTCAACACTAAAGGATTTGCTTTTTAGTGATAAACACATTTTGTGAAACAAATTTCATATGGTATTAGTAGATATGTTTTTACTGTTTTAACTGTAGATATAGCCTTTTGAAAGACTAACCCAGACCTGTGTTTATTGCATGATATTGTAAACCACATTTTACTTTCTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTTATTTATAGATGATTATTTAATCCAAGACTTCCAGAGTTTTCTCACATGTAGTGGCCCACTACTATAGCCAAAACTCCGTTTGGGATGGACAGTCACAACATCAGACAAATTACTCCCACACAGACATTGCTTATTAAAAACTGGAGCTGCTAGCAGATTACTTTAAAGCTTTATATTGATTATTAGTGGCCCTAGTGCCAGATTTTTTTCTGCACATCTTTTAGGTTAGATTACGTTGTCCACTTTGCTGCAGTACCAAGTGAACAGGGAAAAGAAATCCTACAAAACATCCCTCAACAGTGAGAGGGAGATGTTTCAGTTTGGAAAGTACCCTATGGACATTTTAGAAATGCTCAGTGGACACCAGGCGCACCAGTTCAAAGGACTGGGGCTGGAAAGACAACTGCAGCACCAACAACAGGTCCAACTTCAGCACCAGCAGCAGCTTCAACAGCAGCAACAACAACAGAGTGAGGCGTCTGGTGGCCTCCTGTCTGGACTTGGCCTTGGTTCCCTTCAAGGATCTAGAAGTAATGCATTTGCGGATTCTTCATCCTTATTTGCCAAAATGAGTGCACCCCCTCCACCTCTTCCACAACAAACTCAGTCATCATCCTCACAAAGCACACGTAAATCAAGCAAGATGAGCAGCAGCAGTGGGAGTGGCAGTTCTGCCTCTGGCTATCCACAGTTCCTACGCACATTTCACCCTGCTGAGGCTGCGCTAGCCCAGGAGCAGCTTCACTCAGGAATGGGGCGTTTTGATTTTGCAGGAAGTAGTACTGGAGGAGGATCTGGGGTAATTGGAGGAGTTGTAACATCTGCGCCACCGCCACCACCCTTGCACCCCGGCCTCTCTGTTCCTCAGCCATCTCCTGGACCATCCTCGTCATCACCCTCCCCTTCAAGTTCAACCACCACTTCTAATAATCCCCCCAGCAGTAGCAGCTCAGTGGCTGGATTAGTCGGAGCCCAGTCTGATGCAAGAAGTTTACACCAGCAGTTTAGTTGCATGCTCGCTGCAAACCAATACCTGTTTTCTGGAGTGCCCACAAATGCCAGTTTAGAACAGTTTCTAGTTCAGCAGAGTCCCCATAATCATCTTGGTCTTGCAGATTCGAATACAGGTCTTGCTCCTCCTCCAGCCCTTCATCCTTCCCACACCCATGGTCATCCAACTCCCCAGCCCCAACAACAGCAGCAGCAGCTGCCACCTCATGCGTTGTCCCACCCTCACAGCCATGCCCATCCACACCACCCTCTACACCCTGCCCCCCAACCATCACCACTTGGTGGTTTTGATTTCCAAGGTATTCCTGTTCTTTCCTCAAATCAGCTGGCTTCTCTAATGCAACAAGAAGCAGGCCTGCCTTTGCCACTCCCACTCCATCTCTCTGTACCAAAAGATGATGGGAAAGGTGATAGTGGATCTGGGGCTGGAGGAAGTGGAGGTAGTGGCAGCAGGAGAAAGAAAGCCATGGCTGGCTACCTGCCCCAGAGGAAGACAGATGGTAACAGTAGCAGCAGTACAAGCAGTGCTAACTGCCATGGCAGCTCTGGGGCACATGGTCATGATGGGTCCTCTGGTCTTGTGGGAGGAGGTGGAGGGCCTGAAAACCAGCAATCAATGACTCCCAATATCACACAGCCAGAGCAAGAACCTCTCTTTCATTGTGGAGAGTGCGGCAAGTCTTTTTCCCACCTCCCAAGCCTTCGTCGACACATACGCTGCCATGGAGAAGATGGTAGTGGTCCCAACAGCAGCACAAACACAAACCCAAGTCATCAGCACCAGTCAGATCTCCCCCATTCAACACAAGATGGAATTTCTCAAAATGCTCACCACCAGCATGAGAATCCAGACCCCATGTCTTCCGCTTGCTCAAGTCCAGATAAATCATACTGTTGCAATGAATGTGGAAAGGGGTTCAAAAAGAGAGGACACCTGCTTCAGCATGGCGTCATCCACTCTGGAGCTCGTCCATATGCCTGCTCTGTCTGCGAGCGTTCGTTCAACCGTCGAGAGTCTCTCACTCGACATGAGAAAATTCACGAAGAGAAGCCCTACCGCTGCCCTGCTTGTGGGCGCTGCTTTAGAGAGAGCACTTCTTTGCTTAACCATGCTGCATCAGGTGACTGTGGCAAGCCAGGGAGGAGATCTAGAAGCAGTGATGGTAGCTCAATAAGTTCAGTAGAGGGCAAAGTTGAAAGTGATTTTTCAGGTGGACAAATGACTGACACAAAAGAATTAGTATTTTGCAAGAATGAGGATAGCACAGCAGGGATGTCTTGTGACAGTCTGTATTCACAGGGAAGAAGTGCTAATCAAAATCCTGTGGGCAAAACTGAAGAGAAGTATAATCCAGAGTATTCAAGAGATCCGTACCAAACGTCATACAGGGTCGATGACTACCGTCGTCAACAGGGCAACCCATCATCCTACTCTGGAGACTCCTGTAGTAACAGCATGTCAAGTCCGGCTCTCAGAAAAGCTCCTTTAGCCCCAACACTTCATCCACACCCTCAAAATCAGCAGCACCATCACCAACAGCAATCTCATCTTCCTCTCTCCTCTCTTTTGGATGACTCTGAAGATGAAGTCACCAGTAGTGCCATGTCTGCCATCGCTGCAGCTGCTGCTGCCTCTGTCTTGCCTGCTGAAATGAACAGTACTGGGGGACGAGAGGAACGGAGAGACATTATCGGAGGTCTGTTAGGAGGGCTTGGCTTCGGGTCTATGGGTGCCTCTTCATCTACATCTACAGGAAATGGTGGGAATGAAGAATGCCTGAGTGGTTCAATGATACCTTTATCTCACCCCACCCAACAGCAGCCTAATTCACAGAATGCCAACAATCCTAATGCCAAACCCAAGCGGCCACGGAAGCCCAGACAGAAAAGAGAACCGAGACCTGGTGGGGCTCCAGGAGAAGGAGTGAAACGTCGGAGAAATAATCCGAGTGGTGCTGCTGGAGATGGTTCCGAAAGGCCTTATTTATGCACTGTTTGTGGGCGGGGCTTTAGCAGACGTGAGACCTTAAGACGGCACGAACGTGTGCATACGGGGGAAAAGCCATTTCATTGTGACATTTGTGGTAAAGACTTCCGAGAGCCGTTTCATCTTACCAAACATCAGACTGTTCACTCGGGGGAGAAGAACTACAAATGTAACCTTTGTGGAAAAGATTTTGGATATGCACAGAGTCTGAAAAGGCATGAAAAACTGCATCTACGGGGAGATTTCAAGCCAAGGCGGAGTAAAACCAAATCTGCTGCAAATCAAGGGGGACCCACTAATCAAGATCAACCTGATCAAACCAATCAATCTAATCAAACCAACCCTGGCGCTTATTACTCCTATTCTCAGGATAAAGTTCAAGGATCTAATGCTAGCACAAGCAACCAACCCCCTCCTAAGCTATATACATGTGAGATTTGCTGGAAATCTTTCCGCCATCACTTCCACCTGACTGCTCATCACCAAGCCATTCATGAACACGGTGGGGAGAAACTGTTTTCATGTGAAGTGTGCGGTAAGGCGTTTTCTTACTCCAACAGCCTGACCAGACATAGATTATCTCAACACGGTTTGACTCGTACTGGGCCAACAACACAACCAACAGGAAGTGAATCTATTGGAACTGCCCCATCTGTCTCTGAGAGCGAGGCTGCAACCAATGCACTCCTTCATATAACACCTGAAAGTGGAAGTCATGGAGTACAACAGCCCCATTCAACCATAGCTCACACACAGCATCCTCAGCCTGCTGGTTATTCTCCTCTCTTCTACACTCCAGAGTCAGGACATCACAGTTCAAATGTCACTTCACACCCCCAACATCTGCACTACTCAAACCCCAATATGGGTCCCCTCCAGCTTCAACAGCCAATCGGTGGGAAACAGCTAATTTATTCAGGGGTTCCAGGTAACACCCTTCATTCCACTCCACCTCATATCCACATTTCGCCACCCCAGCACTCTCAACACCACCAGCAACAGCACCTTTTTTCAATGCAGTCTCAACATCCACAGCCAAGCCCTCAGGCCCCGGGAGATGATACCCAGAGGAAGAAGAAAAAAAAAAAGAAAAAATATAAACTGGCTAGTGGCATGCAGTTGATGACTGGATTCAGTGCTTACGAAATTGCCAGGAGGCGTATGTATTTAAAACGGAAGAAATGCAGGCTTCAGCAGCAGCTAAAGAGAAAGAAGTGGATAGCTCAGCTGAAATGGGCCAAGTTTACTGGAGGAGGGCTTGGTTTAAATGTAGGTGGAGGCACATGGCGTGCAGGGCGGTTAAGGTTTAGAGGCCTTCAGTCTCTCATCGTCCCCTTAAAGTCATATTCTTGCCCTGTCTGTCCCTTTACCACTTTTTCAAGCCGCATAATTCTTTCAGTGCACCGTGTAACCAGGCATCCTCCAAGAAAACATGGCCGTCAGAATCGACTGCGCTGCATAGTCTGTGGAAAACGTTCTCGAAGGCTACTGACAGCTCTCCGTCATCGGGCCCACCACCTGTCTCAAGGGGCGTTCTCTTGCTCTCGATGTCCCTCTAGATTCTGGAATGGCACCCTCCTGCAGCGCCACAAATTTGCTTGTCAGCGTGTCAGTAGAGGAATCAGAATGTCAATAAAGGGGACTAATGTTCAGAAGACAGAGGACCAGATTGAAAGATCAACAGTTGTGACAGGGTACAGGCACTAAGTAAACTGACATCTATAAAAGGCCTTAAGGCCTTAAAAACTGATGTTTCCGAGGCAAGGATCACATGACAATAGACATAGAGGACTTTGATGGAAATCGCCACACATTAACTCCTTAAACATGTGGTCAGACTATAACCAAGGGAGTGCCTCTAAAAA

Function

symbol description
znf865 Predicted to enable DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Orthologous to human ZNF865 (zinc finger protein 865).

GO:

id name namespace
GO:0046872 metal ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03811184_03815473.mRNA True 5184 mRNA 0.47 2 3810295 3815631

Neighbor

gene id symbol gene type direction distance location
CI01000321_03795430_03804685 SHISA7B, SHISA7 coding upstream 5560 3792915 ~ 3805511 (+)
CI01000321_03767896_03783640 CNOT3, CNOT3B coding upstream 26369 3767896 ~ 3783926 (+)
CI01000321_03749658_03759359 U2AF2.S, U2AF2, U2AF2A, U2AF2B coding upstream 50650 3749658 ~ 3759645 (+)
CI01000321_03739229_03740955 NA coding upstream 69305 3739229 ~ 3740990 (+)
CI01000321_03714795_03718845 NA coding upstream 91210 3714476 ~ 3719085 (+)
CI01000321_03820289_03828024 DBP, DBPA coding downstream 4493 3820124 ~ 3828772 (+)
CI01000321_03898978_03936261 GRIN2DA coding downstream 83347 3898978 ~ 3936261 (+)
CI01000321_03937712_03954703 GRIN2D coding downstream 121801 3937432 ~ 3955589 (+)
CI01000321_03981145_03984891 NA coding downstream 165514 3981145 ~ 3984984 (+)
CI01000321_03989853_03999565 CACNG7 coding downstream 174098 3989729 ~ 4001036 (+)
G457874 NA non-coding upstream 71702 3736446 ~ 3738593 (+)
G457872 NA non-coding upstream 78185 3722749 ~ 3732110 (+)
G457859 NA non-coding upstream 114090 3692881 ~ 3696205 (+)
G457842 NA non-coding upstream 174815 3631777 ~ 3635480 (+)
G457878 NA non-coding downstream 22676 3838307 ~ 3838532 (+)
G459126 NA non-coding downstream 283390 4099021 ~ 4102339 (+)
G459178 NA non-coding downstream 420873 4236504 ~ 4236726 (+)
G459180 NA non-coding downstream 432975 4248606 ~ 4248923 (+)
G459181 NA non-coding downstream 433438 4249069 ~ 4249296 (+)
CI01000321_00815160_00819665 NA other upstream 2987448 815160 ~ 819749 (+)
G456774 NA other upstream 3383270 426083 ~ 427025 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 190995 4013468 ~ 4015412 (+)
G459303 NA other downstream 669766 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 699903 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 931781 4747650 ~ 4749579 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location