CI01000321_03981145_03984891


Basic Information

Item Value
gene id CI01000321_03981145_03984891
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 3981145 ~ 3984984 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_03981145_03984891.mRNA
ATGAGTTCATTTAGCACCAGGGCACTGACGCTCCTGTCGTCTGTGTTTGGGGCGTGCGGGCTGCTCCTGGTCGGTGTGGCTGTGTCGACGGACTACTGGCTGTTAATGGAAGAGGGCATTGTCCTGCAGCAGAACCAGACCAATGAGGTGAAGATGGCTCTGCATTCTGGACTCTGGAGGGTCTGTTTTGTGGCTGCTGGTCTTCAGTGTCCCTGCACCGCACTGGTGTGGCATCCTGTTGCATCACCCTCCTAAATCGTGCCACACATTGTAACAGAAACTAGTGAGGCTGTGTGGGCAAACCACTGCAAGATGCCAAATCAGTAACCACATAAAATTCCTAGGCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_03981145_03984891.mRNA True 348 mRNA 0.53 2 3981145 3984984

Neighbor

gene id symbol gene type direction distance location
CI01000321_03937712_03954703 GRIN2D coding upstream 25556 3937432 ~ 3955589 (+)
CI01000321_03898978_03936261 GRIN2DA coding upstream 44884 3898978 ~ 3936261 (+)
CI01000321_03820289_03828024 DBP, DBPA coding upstream 152373 3820124 ~ 3828772 (+)
CI01000321_03811184_03815473 ZNF865 coding upstream 165514 3810295 ~ 3815631 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 coding upstream 176410 3792915 ~ 3805511 (+)
CI01000321_03989853_03999565 CACNG7 coding downstream 4745 3989729 ~ 4001036 (+)
CI01000321_04013470_04014515 CACNG8 coding downstream 28486 4013468 ~ 4015412 (+)
CI01000321_04022562_04030274 CACNG8A coding downstream 37578 4022562 ~ 4030336 (+)
CI01000321_04063726_04074390 NA coding downstream 77707 4062691 ~ 4074493 (+)
CI01000321_04082880_04096700 SLC2A3A coding downstream 97896 4082880 ~ 4097297 (+)
G457878 NA non-coding upstream 142613 3838307 ~ 3838532 (+)
G457874 NA non-coding upstream 242552 3736446 ~ 3738593 (+)
G457872 NA non-coding upstream 249035 3722749 ~ 3732110 (+)
G457859 NA non-coding upstream 284940 3692881 ~ 3696205 (+)
G459126 NA non-coding downstream 114037 4099021 ~ 4102339 (+)
G459178 NA non-coding downstream 251520 4236504 ~ 4236726 (+)
G459180 NA non-coding downstream 263622 4248606 ~ 4248923 (+)
G459181 NA non-coding downstream 264085 4249069 ~ 4249296 (+)
G459182 NA non-coding downstream 265247 4250231 ~ 4250465 (+)
CI01000321_00815160_00819665 NA other upstream 3158298 815160 ~ 819749 (+)
G456774 NA other upstream 3554120 426083 ~ 427025 (+)
G459303 NA other downstream 500413 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 530550 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 762428 4747650 ~ 4749579 (+)

Expression


Co-expression Network