CI01000321_04965389_04968595


Basic Information

Item Value
gene id CI01000321_04965389_04968595
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 4963879 ~ 4969345 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_04965389_04968595.mRNA
AGAATTATTTACGTTTACCGAATCATTAAAAATACACGGGTCTTATTAGATGAGTGGGCGGTAGGGGCGTGGCCAGAACTCGGGCAACCGCAACCTGTCAATCATATACTGTGGCGGGAGCAAAAAACGAGTGTCAGAGAGGATGCCTAGGCTATGATTGCCTTACTTTTCCTGTTACTGGCATCGTGTGTGCGTTTGGACAAAAACCCACAGTAAACGCTTAGAGGGATCTAACAAAAGCTCACAGAAGTTCAGTGACCGCAAAATATGACTGTATGAGTTGACAGAATCGTTTTTTTTCTTTTTACACTTATTGAGTGTTTTTTTTTTTTTTTTTCTTCGACGCTTGTCACCTAACCAAAGAGACACCTGCCGCTGAAGAGCTACTCCTTTTTGTAATCTCAACCGACAGTTTCTCGTATCATTTTTCTTCTCTTGTGGAGGATTTTGTCTCAGAAAGGAATTATTCAGTAACTTGTTCCAGTAAATTCCAACAGACCTGCTCAGGATGCCTTGGATGAGCGTCTCTCTGCCATGGAGTTGCATTCGGGAAAGCGCGAAGCTCTGTGACTGAACAAACTAGCCGTACTGCGGCACGGCTTCGCAAAATAAACGCTTTGCTACTGTCTGACCACTTGCTGAGTCGCAGGAATGTTGTAAAAACCGCTAGTTTTGCGTTGGACTGGGGGACTGAGAGTCGAAGAAGGTGAAGAGACCACAGCAGGTGCACGTGAACGCAGGAATATTATAATGGCTCTCGCGGCGGTTTCCCTCTACCTTCTTGCGCTTGCCTGGATGAACTTGCGCCCGGTCCACGCGAACAACCGCCACGCTGTGTACTGGAACAGCTCAAACATCCAAACTCAGTGTCAGGGTGTTTGTACCTACATGTCTCTGTTAGTACAGAGTCTATTTCTACTCCCACACTGGGAGAAGATCTGTAAAATAATGCGTAAACTGACCCAGATTGCAGTGAGCCTAACTCTTGGTCCAGCTGAGGTAGACGAGTTAGCGGTGGAGCCGGTAGAGTGCTTTATGTGGGCTAACGTAACCGGGATCACTCTCACTCCGCATCCTGGCACTCACATCGCCGAGACAGATAAAAGAGCAGACTGATAAAAGCGCTTTCATGGATGCGGCGAGAAAACCTTGCTCACGGAGTCTGTTTGAAATCTCACTGTAAAGTCAAGTGAATAGAGGATCATCAATCATGTGAGATGATGCGTCTGGGGAAAATGCCAATTCTGGAAGAAGTCAGAAAGAACGCGACTGCTGGTGTAATATGACAGAAATTCGCATGAAGTGCTTCAGATATATGTAAACAACTGAAACAGACATTTATAGGTAGGGGTGGGCGACATGGCAAAAATATCACAGCACAATTTTTTTTTCAGGAAAATCACGATTCGCGATTTTATTACGATTTTTTCATGTTTATTTCACTATTTCGCAAGTGACTGAGCAGGACAGCCAAACTAATTTTCCTGTTTTAAAAATGTTGCCTAACAAGGTAACAAAATATAAAAGAAAAAAGAATGACAGACCATTTAGGCCGAAGTCGGGGTGAACGAAGATAAAATATTTCTTTTATTATTTTATCTATAATATACAAATGAAATAAATTGTGCTTTATTTTTTTCAGTAGGTGTAATAACAGTAGTATTCAAGAAATTGAATAAACAAATGTAAAAACAAAATACTAGAGTTCACTGAATAAATTATATACACTAATTCTTATTAAAGATACTGAAGTTATTCAGTGAAAAGCAGTAAGTGATTTTCTCTTTGTTTTTTGTTGTTTGATTAACATTAATGACAAGCAGCAGCAAATTTATTAGGCTGCTGTCACTTTAAGACCATGCACGGATCTAATATACAGTTAACTTTCACTTAAAACATAATCAACTGTATTTATTTAAACCTTTTTTGACAGTTTCAGCGCAATAAGACGGGAAAGATAACGTAGTTCAGTACTCACATGCTGTTTGACAGGCTTTTAGTGTGCACGCTCAGAAAAGCGCATGTCAGAACAGTGTGCGAATAAACTGTTTAACCGACAAGGCTTTAAACACAAATTAACTTTCATGATTGTGAATAACTGCAATGTCATATGAGCTATAGTCATGTGATGTAAATGTACGTCGCATTGTACAGCATGTTGGGACAAAGGCGCCAGAACTTGCACTGTGGCACGATACTACGATATTCCTTAAAAAGCAGATCGTGGAGGCATTTGAATCATCCACGATTAAAAATCGTGATATTGCACACCCCTATGTATAGGGTGTTGATTCGGATGGTGAGGATGAGTCAGTAGCACACGGCTGGGCTTTGATTGCATCTGCACGGCCCCATTAGGAGGCAACGCTCTCAGCTTTTGCTGGCACTGGCACTGCAACCCAAGCTCATTACAGCTGTCCCAGCTAATGGAACACACACTCACACACAAAGTCATTTAGTTGCGTTTTGTCCAACGCACACGCAAAGTCCCTTGCAAACAAGTATGCATACTAATGTACTTTATGCGGATCAAACTGACTTGTAAGCCGAATGAGAAGAACATTCATGCACACGAGTGACAGGAAAAATCCAACCTTTTTACACACACACACACTCACACATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_04965389_04968595.mRNA True 2626 mRNA 0.42 3 4963879 4969345

Neighbor

gene id symbol gene type direction distance location
CI01000321_04864287_04872091 EFNA3A, EFNA3 coding downstream 91788 4863945 ~ 4872091 (-)
CI01000321_04767177_04772703 EFNA1A coding downstream 191176 4766962 ~ 4772703 (-)
CI01000321_04710611_04711031 S100A10A coding downstream 252495 4710452 ~ 4711384 (-)
CI01000321_04694693_04706830 SNX27, SNX27A coding downstream 256722 4694565 ~ 4707157 (-)
CI01000321_04514194_04514490 NA coding downstream 449389 4514044 ~ 4514490 (-)
CI01000321_05078234_05124375 NA coding upstream 108547 5077892 ~ 5124437 (-)
CI01000321_05141500_05146892 NA coding upstream 171665 5141010 ~ 5148412 (-)
CI01000321_05151190_05175511 NA coding upstream 180966 5150311 ~ 5175511 (-)
G459764 NA non-coding downstream 28198 4934619 ~ 4935681 (-)
G459645 NA non-coding downstream 165105 4798495 ~ 4798774 (-)
G459610 NA non-coding downstream 214298 4701479 ~ 4749581 (-)
G459612 NA non-coding downstream 247065 4712274 ~ 4716814 (-)
G459598 NA non-coding downstream 321270 4642303 ~ 4642609 (-)
G459807 NA non-coding upstream 60634 5029979 ~ 5030313 (-)
G459919 NA non-coding upstream 216999 5186344 ~ 5186707 (-)
G459011 NA other downstream 1147484 3810127 ~ 3816395 (-)
CI01000321_03737149_03737996 TMEM238A other downstream 1225894 3736456 ~ 3738096 (-)
G458957 NA other downstream 1296880 3661626 ~ 3666999 (-)
G458859 NA other downstream 1474345 3471881 ~ 3489534 (-)
G458802 NA other downstream 1871952 3088115 ~ 3091927 (-)
G459803 NA other upstream 49621 5018966 ~ 5025886 (-)

Expression


Co-expression Network