CI01000321_05078234_05124375


Basic Information

Item Value
gene id CI01000321_05078234_05124375
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 5077892 ~ 5124437 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000321_05078234_05124375.mRNA
ACTTTTTGTTTCGACAGGGAACTTACTAAGCTGAGGATCTTTGGTCTGTGAGAGATCTGTCAATGGCTTCACAGACCATAAACTTCATCACGTGGAATGTTAATGGACTTAAGCAACACAGAGATCAGAAATTTCAAGAACTACAAAATGCTGATGTTATTTTCTTTCAAGAGACGCACATTGGAGTAGGAGATGAAAATATTACAGAAGACTATAAAGATGAGTGGCATATTTTCTACACAAAGTATACCTCCTCTAGCAAGGGATCAGCCATACTAGTGAAGAAAACACTAGATTTCAAATACATAAGTGATGAAAAAGATAACAGTGGAGCGTATGTTGTGTTGAAATGTAAACTGGAAGGTCAGCCGTACACTCTTGTTAGTGTTTATAATCATCACACAGACACAAAAACCCTTGATAAACTTTCAAGGTACCTTCAGTCAATGACCACAGGGCTGCTGGTGATTGGTGGAGATTTCAACACGGTTCTCAATAGATTTATCGACAAAAAATGGAACAATTTGACAATAAACAGTACTCATAGTAAATTGCTGTTATTTGTGGAAAATTTCATGAAATCTCTTCAGCTGGTTGATGTCTGGAGAAGAAAGAACCCCATAAAACAGGATTATACATTCTACATAAAAGATTGTCCTTCATCCAGGCTGGATTACTTTTTTGTTCCAGAAGAATGTATGTGGCGTGTCAGAAGTTGTGAAATAAGAGACTCAAAGATAAATGAAAACAAAGACCATCGGCCTGTGTCTTTAGAGATCAACGTCCCTGCGATGCCTATTCAGAATGTTCCCCAGATACAAACAATCTTCCAATGGCTGAATCTAAAAAAGGACCTTTTGACAGATGAGACAGGTTCATCAATGGGTGAAGAAAGCTCAAAAGCGGTCAGTGAAGTTGACATTGTGTCAGCTGTGCATTCTCTTCAAGTGTCAGACACACCGAGACCAGACGGCATCCTAGCATCCTCCTACAAAGACAAAATTAAGGATCTAATTTTATACATAAAGATGCTCTATGACAGAATCCACAGTGGTGGATTTAACTGCTCTGAGACATACTTTAATGAAACTGTGAAAAGTCCACATGATGATAATCAACACTTTTTTAACGTTGACTACGTCATCATTGCAACTATTCTGGCAAGACATCTAGATGATGTCATTGAGTCCCTTCCAAAGGGGCGGATACCAAAAGAGTCGGCAACTGTCATGATCACTCCCAAAACACATTATGCTTTAATAAGTTTGAGTCATATTAAGGATGAGCTAGAACAGCAAAAACAGTCAAACCCGACTCTGAACCAGGATCTTCTCGTTATAGAAAATCTCCTCAGTGATGCAAAAGAACATTTTTCAGTTGAGAAATACAAACTTCTACATCAGGGCTGCCCTTTGACCCCAGGACTCATAATGTTGGCTCTAAAAAGCTACGCTTCACAGTTATTTGGACATTTAGAAAAGTCTGGGGTTTTTATTTTCAAACAAAGTGTGATAGTTTGCTTTCAGCCTGAGGACCTAGAAATGGTCAAAGCTACTGTGGAGAACAATACTAGTGAAGTATATGAAATAGAGATATTATCCAGAGGAAATGGTGAACTGCTACAATTAAACTGCATAGGAAATGATTGTAAGGATGAGGACTGGGAAAAATGGAATGCAGACATATTTGGGAATAATGATGAAGAATCAGAAGAAAATTTCTCTAAAGCAGATGAAAGGGATGATGGGATTAAGGTGTATGAAGAGACTGAGAATCTAAAGTCTAAAATCTTTGAGGAAGATGAATCATTGGAAGTCGACGTAAGATCAGCCATTTCTGGAGCTCCAAAAGAAGAGATGGAAGCATTTCATGGGATGAAGAAGAACACACCTCCACTTCTTCCTGTACCATCACAATCCTCCTCATTCTCTTACGGACTTTCCATCCATCCCACAATGAATAGACAAGATGAGATCATGGAGGGGGTGAGACAAATTATGAAAAGATTCTCCAAAAACTCAGATCAAATAGATAAAGGCAGCAGGAAGAAGGCAACCATTGGGATTTTTGGAACATCAGGAGAAGGAAAGAGCTCCCTATTAAGTGCAATATTGGGGAAAAAGAATCTACTGCCATCTGGATGTTTTGGTGCCTGTACAGCTGTTGTTACTCAGGTGGAAGCCAATCTGACTGACTCCAACTACATAGCAGAGATTGAACTCTTCTCTAAAGAGGAGTGGGAAAAAGAGCTCAAAGATCTTTTCAGTGTTTTGTCAGATGAAAGTGAGGACAGGGATGATGAATTGTATGAAATTGCTGTAGAAAAGATAACTGCGCTGTATGGAGATGATGCAGATGAGAAAACATTAGAAGAGCTCAAGAATGATGCCAAATTTGCTGAGATTGAATACTTTTTGTCCACTAATAAGGAAACTTTCTCAAAAAGTGATGTCAATGAATTTATCGATGAGGTTGCAAGTTACATACAACACAGTGAGTCAAGTTCCGGTAACTGGTACTGGCCGCTTGTGAAGAGTGTGAAGATCAAGATTCCTGATTGTCGTGAACTTCTGGAACACATTGTGCTTGTTGATATTCCTGGATCTGGAGACTGCAATAAGATTAGAGATGATCTGTGGAAATCTAAACTAAGAGAGTGCTCTTCTGTGTGGATTATTAGTGCTATCAATCGAGCAAGCACTGACAGTGGCCCCTGGGGGATTTTAAAGCACTGCACTGAAGAACTGGGACCAGGAGGAGAATGTAAAAGCATTAACTTCATCTGTACAAAGACTGATGACATCGATCCAGAAAACTATGTTAGATATACACGGCTTCCTAGAGATCAAATCCCAGAAGACAAGAAAATATTCAGTTCTGACAATCAGTTTCAAGTTTTTACTGTAAGTTCCAAAGCATTCTTTGACCCCAGTTTAAATCTGGAATCTAGTGAAACAGAAATCCCTAAGCTGCAGGATGAACTGAGGACTCTTAACAAGAGCATGAATCGAGAACTGGTCAGAGATTATGTAAAAGTAGCAAAGGGAACTTTGCTCTTAATCCAAAGTGGCCAGCGAGATACAGACAAGAAAATGATGAAAATGAAAGTCATGGAATTAGAGAAGAACCTAATGAAGGCACTAAATGAACTGGACAAATATTTTGACAGCATTTATAGTGATCTGGAGCAGTGTCTCTCAAAGGGAGTGGACGAATCAGTGAAATCATGTGTTGCTTCCACAACGGAATTAATAACTAAAAAAGATGGAAGGGGGTTCCATAAAATCCTTGGAGCTTTGTGCAAGAACTACGGATGCTATTGGTCGAAAAATTGGGATGAAGTTTTAGACCTGAACAAGACTTTGGCCAAACATTTGCACACATGCATTGATGAAGATTTCATTAAGATTTTTCCTGTGACTGAAACAACAGGGAGGTCAGTGCAGGAACAGATTGATAAGTTTAGTATCATCCAGAGTGACTCTGCTAACCCCTCATCTCCCATGCATCACATTGAGAACTTCATTAAAAATGAGAAGGAAACACAATTGACTCCATTGCTCAATAGAAAAATTGTTGACATGAAGAAGCTCATCTACTCATCAATACAAACAACTATTCGGAATGAAATGACTTCTTGCTATAAAGAAGCTGCAGCAGTGACTGGAACTGGATCCATGAAGAAAAAGCAAGATCTGCTAATAACCACAGTTGATGAGATAAAACATGACATGTTCAACAAAGCAAAAATGGAAGTGCTTAAAACGTTGAATACCTTAAAGCTGCTCATAATGGATGCTCTTGAAAAAGAACTAAAGAATGCAATTGAACGCTTACAATCACAAACCAGCAAAATCAGAGAGGCCTACGATCAGGACATGATGAGGAGCCTGAAAAAGGTTCGGGGAAGTATGGAAAAAAAGGTATCCACTTTGCCTTATCTGGCAAAACGTTTTACCCTTTTCAAGCACCTTGCAGAGGGTAAAAACATTTACAATTATGGTAAAAAAAGATCCGAGATCATTTCAAGTGAGATCACGTTCCTACGATCCACGATCCACGTTAGGGTAAAATATTTGTCAGGGCTTGGAGGTGTTGGGGCCAAGGATGTGATTAAGAATATTATGCAGCAAGTCCTAGCAGATGACCTGGCTAAGGAGTTCAACTGGCAGGGGAGAGGAGAGAAAAGACCCTTATCTCAGCTTATTTTAACAGATGTAATCAGAGAGGCTGCACTGAAAAGAAATGTAATGAGGGTCGACTGTGAAACAGAAATGAAAAAATATCTGAGTTACCTAGCTGATCGACTCACTCGGAAAAGACAAAGGGAACAAGCAGCTGAATCGACAACAGTCTACTGTCCCAAACGTTATCCTGAGATAAAAGAGACCCACATTGGAGTAGGAGATGAACGTATTATAGAAGGTCTAAAAAATGAGTGGCATGTTATCTACACAAAGTATACCTCCCAAAAGGGAACAGCCATACTAGTCAGAAAAAGACTAGACTTTGAATGTATAAGTGATGGAAAAGATAACTGTGGAACATATGTTGTGTTGAAATGTAAACTGGAAGGTCAGCTGTACACTCTCGTTAGTGTTTATAACCATGAAACAGACACAAAAACCCTTGAAAAACTTTCAAGTTACCTGCAGTCAATGACCACAGGGCTGCTGGTGATTGGTGGAGATTTCAACACAGTTTTCAAGCCATTTATTGACATAGATAACAAAATCCATTCAAAAAAGGTTCAGAAAAATAACCTGAAGCTTAAAAAGTGGTGGCATCAATATAACGACTCTCAAATAAGGACACATTCCCACAGAGAACACGACAACAGAGACGGGGAAGGTGAAGGTGGGGCCTTCCCCAGGATGAGAATGGTCACGAGCAGGCAAAATAGTTGGGGGAGTGGAGGGAGGGAGGAGCCATGGTGGAGAAAACATTATGAACAAAACATAATCCTGACAACACACAAAGAAGAATGTATGTGGCGTGTCAGAAGTTATGAATTCAGAGACTCAAAGATGCATGACCATCGGCCTGTGTACTTGGAGATCAACAATGTTTCCACAAAACTTTTTCAGAAAGATCCCCAGACACAATCAGTTTTCCAATTGCTGAATCTAAAAATTGGCCTTTTGACAGATGAGACGGGTTCATCACTGGGTGAAGAAAGCTCAAATTCGACACACCGAGACGGCATCCAAGTTTCCTTCTATAAAGACAACATTGAGTATCTAATTCCATACATAAAGAAACTCTATGACAGAATCCACAGAGAGATAAACATAGTTCTTTCCCCCTTTACTAGACTGATCATGTATGCAGTTGTTACCTTGCATGACTCAGATGAGGTGATGGTGGTAGCATCAAACTGGTTGAGCACAGACAAGAAACAAAGTTACTGGCCCCCATTCAAATCACCAGAGAAGTGCATGGAAGCTGTTCAGAACAGAGATAAACCTGAAACAGGAGGGAAAACATGGGAGAAATTAAATATTAGCTTTCGCAAAGAATATGACAATGATGATCTCCTCCAAATGCTGAGAGACATCAAGAGCACGGTTCAGGAAAACTCTGCCATGTTAAAGAAACTACTGAAAGACAATATGGCTTCTGAATCCCCCAGCAGTACCAGCTTTCCCACTAAAGATGTTAAAACAAGCCTAAATCTGCCTCTTACAACTTTTGAAGATGTGGTCAGGACTGAAATGGAGCTCAGTAATGCAACAACACGCCAAAAATATGTGAGTCAACACAGCACTTCAAGAAAGTGATCATGTACACTTAGCTGTAATGTACACTCTGAACTGTAATGCCTGTAAATGGTTTATTTTGCAATAATTACACACATTATCCTGCTTATTCCATGGGTACTTAGTAAATAAATAAATAAAATGGACATTAAATACAGTGTTATAATTTTAATGCAGATTCATTATGAATCTGCATTATTATTAATAACTTTTAATAACTTTCTATGGATTAGCATAACACAGATAACTATTTCAAGTTCTCAATCACCCAGCTCTGGTTCCTTGTTCAACTAGTTGGTGCAAGATGGTGCAAATGAGCAATATTCTACATATACAGTTCCGTTCCCATTCAGTCAGAATAAG

Function

NR:

description
hypothetical protein cypCar_00047857

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000321_05078234_05124375.mRNA True 6122 mRNA 0.39 28 5077892 5124437

Neighbor

gene id symbol gene type direction distance location
CI01000321_04965389_04968595 NA coding downstream 108547 4963879 ~ 4969345 (-)
CI01000321_04864287_04872091 EFNA3A, EFNA3 coding downstream 205801 4863945 ~ 4872091 (-)
CI01000321_04767177_04772703 EFNA1A coding downstream 305189 4766962 ~ 4772703 (-)
CI01000321_04710611_04711031 S100A10A coding downstream 366508 4710452 ~ 4711384 (-)
CI01000321_04694693_04706830 SNX27, SNX27A coding downstream 370735 4694565 ~ 4707157 (-)
CI01000321_05141500_05146892 NA coding upstream 16573 5141010 ~ 5148412 (-)
CI01000321_05151190_05175511 NA coding upstream 25874 5150311 ~ 5175511 (-)
G459807 NA non-coding downstream 47579 5029979 ~ 5030313 (-)
G459764 NA non-coding downstream 142211 4934619 ~ 4935681 (-)
G459645 NA non-coding downstream 279118 4798495 ~ 4798774 (-)
G459610 NA non-coding downstream 328311 4701479 ~ 4749581 (-)
G459612 NA non-coding downstream 361078 4712274 ~ 4716814 (-)
G459919 NA non-coding upstream 61907 5186344 ~ 5186707 (-)
G459803 NA other downstream 52006 5018966 ~ 5025886 (-)
G459011 NA other downstream 1261497 3810127 ~ 3816395 (-)
CI01000321_03737149_03737996 TMEM238A other downstream 1339907 3736456 ~ 3738096 (-)
G458957 NA other downstream 1410893 3661626 ~ 3666999 (-)
G458859 NA other downstream 1588358 3471881 ~ 3489534 (-)

Expression


Co-expression Network