G456607


Basic Information

Item Value
gene id G456607
gene name NA
gene type unknown
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 96116 ~ 99195 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524154
CCTTGGGGATGGACTGAATGGCCTCCACATTAGACTGGAGTGGGGAAATGCCCTGTGTTGACAACTTGAACCCCACAAACTCGATGACGGGTACAGCAAAAAGGCATTTTACGCCATTTAAATTTAGCCTGTGCTTGCTGAGTGCATCAAAAACCCTGTTGAGGTGCTCATCATGAGTGTGCATTGTGGGTCCATGCACGACAATGTCGTCAAGGTAGATGACGACGCCTGGTATTCCCGCTAGCACAGAGGTCATGACCTTTTGGAAACAGGAAAGGGCGGAGCTAAGGCCGAAAGCCATCCTAGTATAACGAAAATCTCCCTCATGTGTCACAAAAGTCGTCAGATTTCTGCTGTCAGCATGGAGGGGCACCTGCAGATAGCCTTCTCTTAGGTCCAGCTTAGAAAACACTGTGGAATCATAGAATTGAGCCGTGAGTTCCTCCGTCATTGGTAGCGGGTACTTATCTGGAACAACTGCCTTATTGACTTGCCGCAAGTACAAGCAGATGCACAGAGCACCAGATTTTTTAGTGGCCACCACCAGGTTTGAGACCCAGGGCAACGCATCCACATGCTCAATGATGCCTGCTCGCAGCAGGCGCTGTAGTTCCGTTGACACCCCCTCCCGCAGGGCCAGGGGAATACGGCGTAGTGGCTGAATGACAGGGCTGACAGTATGGTCAATGAGAGGCTGGTGCATGAATGAGGTGAGGCAGCCCAGCCCATCAAACAGCGTTGGCCGCTGTTGCTGCCATATTGCGGTCACAGCCAGGATAGCAGCGGGCGAACCCCAGCACGGTGAACAAGTCCAGTCCCATTAAATTTGCTCCTTTGCAGGCCACTTGGAAGATAAATGAGGGCAATGTCTTTGCACCGTAGCGCACAGTCAATTTAAGTGAACCCACTGGGGGACACACTGGCCCCCGTATCCAAAAGTAGTGGAACACTCACATTATTCAGGGTGACAGTGCATGATCTGAATGGCACAAGACCTGAAGTTACATTGTGGATGATGGCAGGTGGGAACTGGCTGGTGCGAATCTGTGGTTTAGTTGGGGCTGAACGGCAGACACTAGCAAAATGATTTTTTTTTCCACAATTATGGCATGTCTGGCCCTGGGTTAGACAGTTTTGGGCTCTGGTGAAATGAGAACGAGATCCACAATTAACACAGGGCTGTTGTTGATGTGGTTGTCTACGCTGTTGCCACGTGAGTTGCATTACTGAGTCAGGGGCATCTGCAGCCACTTCTGCACCCCAGTCGGATGGCTGCTGGGCTGGTGAAGTTGTTTCCATAAATGTCAATTGGCTGTGTGTTGACTTATTTTGATTTGTGAGAGTAGCCACACATTCAGCAGCGCTTTCCACTTGAAATGCTAGTTACTTTAAAGAGGGAGGATTACATTCTTCTCAAAATAGTTTATTAAAGGGGTGTTTTGTAAAATGTTCTGGTTGATCCCCTAAGAAAATATTTAATTTTTTTTTCAGTTTTTAGAAACATCATTAGATCACTAAGCTATAATGACAATTTGGGTGGATTGGGTGATTTCCACTCTAAGAGAATTCTCCTTCTAGCTATTAATGTTGCAAAAGCCAAGGCATTCTCTTTATCTTTACAAACCCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATAATTTACAAATCTCATAAACTTATATTTTATTCACAATAGAATATAGATAATATATCAAATGTTGAAAGTGAGACATTTTGAAATGTCATGCCAAATATTGGCTTGTTTTGGATTTCATAAGAGCTACACATAAAAAAAGTTGGGACAGGTAGCAATAAGAAGCCAGAAAAGTTAAATGTACATATAAGGAACAGCTGGAGGACCAATTTGCAACTTATTAGGTCAACTGGCAACATGATTGGGTATAAAAAGAGCCTCTCAGAGTGGCAGTGTCTTTCAGAAGTCAAGATGGGCAGAGGATCACCAATTCCCCCAATGCTGCAGCGAAAAATAGTGGAGCAATATCAGAAAGGAGTTTCTCAGAGAAAAATTGCAAAGAGTTTGAAGTTATCATCATCTACAGTTCATAATATCATCCAAAGATTCAGAGAATCTGGAACAATCTCTGTGCATAAGGGTCAAGGCCGGAAAACCATACTGGATGCCCGTGATCTTCGGGCCCTTAGACGGCACTGCATCACAATCAGGAATGCTACTGTAATGGAAATCACAACATGGTCTCAGGAATACTTCCAGAAAACATTGTCGGTGAACACAATCCATTGTGCCTAAAACTCTATANNNNAAAAAAAAAGCCATATCTAAACATGATCCAGAAGCGCAGGCGTTTTCTCTGGGCCAAGGCTCATTTAAAATGGACTGTGGCAAAGTGGAAAACTGTTCTGTGGTCAGACAAATCAAAATTTGAAGTTCTTTTTGGAAAACTGGGACGCCATGTCATCCGGACTAAAGAGGACAAGGACAACCCAAGTTGTTATCAGCGCTCAGTTCAGAAGCCTGCATCTCTGATGGTATGGGGTTGCATGAGTGCGTGGGCAGCTTACACATCTGGAAAGGCACCATCAATGCTGAAAGGTATATCCAAGTTCTAGAACAACATATGCTCCCATCCAGACGTCGTCTCTTTCAGGGAAGACCTTGCATTTTCCAACATGACAATGCCAGACCACATACTGCATCAATTACAACATCATGGCTGCGTAGAAGAAGGATCCGGGTACTGAAATGGCCAGCCTGCAGTCCAGATCTTTCACCCATAGAAAACATTTGGCGCATTATAAAGAGGAATATGCGACAAAGAAGACCTAAGACAGTTGAGCAACTAGAAGCCTGTATTAGACAAGAATGGGACAACATTCCTATTCCTAAACTTGACCAACTTGTCTCCTCAGTCCCCAGATGTTTGCAGACTGTTATAAAAAGAAGAGGGGATGCCACG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524154 True 2960 TUCP 0.45 2 96116 99195

Neighbor

gene id symbol gene type direction distance location
CI01000321_00086489_00090999 CLIC1 coding downstream 5114 82384 ~ 91002 (-)
CI01000321_00048237_00053007 DDAH2 coding downstream 42681 47974 ~ 53435 (-)
CI01000321_00102298_00125650 NA coding upstream 3052 102247 ~ 126108 (-)
CI01000321_00144312_00147001 NA coding upstream 43551 142746 ~ 147095 (-)
CI01000321_00255117_00255337 NA coding upstream 155249 254444 ~ 255337 (-)
CI01000321_00275814_00280064 NA coding upstream 175316 274511 ~ 280125 (-)
CI01000321_00410748_00435224 VPS52 coding upstream 310945 410140 ~ 435224 (-)
G456613 NA non-coding downstream 27069 68833 ~ 69047 (-)
G456596 NA non-coding downstream 70794 25115 ~ 25322 (-)
G456594 NA non-coding downstream 71606 24278 ~ 24510 (-)
G456631 NA non-coding upstream 56709 155904 ~ 156117 (-)
G456639 NA non-coding upstream 77355 176550 ~ 176789 (-)
G456640 NA non-coding upstream 78605 177800 ~ 178011 (-)
G456644 NA non-coding upstream 91738 190933 ~ 191162 (-)
G456690 NA non-coding upstream 163687 262882 ~ 263205 (-)
G456609 NA other downstream 56176 39518 ~ 39940 (-)
G456597 NA other downstream 68843 25639 ~ 27273 (-)
G458122 NA other upstream 932868 1032063 ~ 1036148 (-)
CI01000321_01451689_01453423 NPY other upstream 1351999 1451194 ~ 1453530 (-)
CI01000321_02282824_02284376 MBPA other upstream 2173850 2282238 ~ 2284934 (-)
CI01000321_03044953_03048124 NA other upstream 2888945 3044880 ~ 3048203 (-)
G458802 NA other upstream 2988920 3088115 ~ 3091927 (-)

Expression


Co-expression Network