G456582


Basic Information

Item Value
gene id G456582
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 176383 ~ 176794 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524125
CCTTGAACACCTGTCTTGCTGGGAGCAGGACATATAACTTAGTAACAGTAGTTAAACTGTAAAGTGCCCACATGACAATCTACCTAACACAGTCCAATGAGCAGTGTACTTGGTAAAAGAACCTTTTTACTCTTTAAAGCAAGAGGAGTACAACATACGCCAACACACACTAAGGAAGGCCTTTGACTGGCCTATGACCTCAGCAGACACGTGGCATCAGCTTGTGGCAGTGTTTAACCATTAGGGTTCTAGGAGCAAAAATAGAACCAACCTAGATACTAGGTAGCTATTTAGCTCGACTAGAGTAGAAACCCAGACTCAAGGAGGCTGATGTAGTTAAAACCAAACCTCAGTAAGGTTTTACCACAAAAACTCACCCTTGAGAGGTCAGCCACCCAGAAGAGTACTCGGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524125 True 412 lncRNA 0.44 1 176383 176794

Neighbor

gene id symbol gene type direction distance location
CI01000321_00150756_00152124 NA coding upstream 24194 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 75797 98296 ~ 100586 (+)
CI01000321_00283589_00284224 NA coding downstream 106530 283324 ~ 284337 (+)
CI01000321_00326486_00355049 NA coding downstream 149599 326393 ~ 355202 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 264588 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 333760 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 372301 549095 ~ 550648 (+)
G456573 NA non-coding upstream 40658 135515 ~ 135725 (+)
G456510 NA non-coding upstream 50475 105953 ~ 125908 (+)
G456509 NA non-coding upstream 85448 85758 ~ 90935 (+)
G456539 NA non-coding upstream 113822 62358 ~ 62561 (+)
G456537 NA non-coding upstream 115288 60864 ~ 61095 (+)
G456583 NA non-coding downstream 1002 177796 ~ 178392 (+)
G456588 NA non-coding downstream 8838 185632 ~ 186342 (+)
G456589 NA non-coding downstream 17433 194227 ~ 194486 (+)
G456689 NA non-coding downstream 86088 262882 ~ 263253 (+)
G456691 NA non-coding downstream 86789 263583 ~ 263835 (+)
G456774 NA other downstream 249289 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 641670 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3612524 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3829832 4013468 ~ 4015412 (+)
G459303 NA other downstream 4308603 4485397 ~ 4488552 (+)

Expression


Co-expression Network