G456589


Basic Information

Item Value
gene id G456589
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 194227 ~ 194486 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524133
TTATAACAGAGATAGCTTGTTGGAAATTATGTGAATTAAGTGATATCTGTTTATAAAGGAAAAATTATAACAGAGATAGCTTGTTGGAAATGATGTGTAAGAAAAACAGAAGAAATTTTTTATATGAAAGAATGTAGAAAAAAGAAAAACCCCAACAACAGATGTTTGTATTAAAGAATGAAAGACAACTGGTATTGTAACACCTTTATTAAAGCATATATTAATTACTTATTAAAGAAGACAAGACAACTGTTATTGTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524133 True 260 lncRNA 0.26 1 194227 194486

Neighbor

gene id symbol gene type direction distance location
CI01000321_00150756_00152124 NA coding upstream 42038 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 93641 98296 ~ 100586 (+)
CI01000321_00283589_00284224 NA coding downstream 88838 283324 ~ 284337 (+)
CI01000321_00326486_00355049 NA coding downstream 131907 326393 ~ 355202 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 246896 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 316068 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 354609 549095 ~ 550648 (+)
G456588 NA non-coding upstream 7885 185632 ~ 186342 (+)
G456583 NA non-coding upstream 15835 177796 ~ 178392 (+)
G456582 NA non-coding upstream 17433 176383 ~ 176794 (+)
G456573 NA non-coding upstream 58502 135515 ~ 135725 (+)
G456510 NA non-coding upstream 68319 105953 ~ 125908 (+)
G456689 NA non-coding downstream 68396 262882 ~ 263253 (+)
G456691 NA non-coding downstream 69097 263583 ~ 263835 (+)
G456711 NA non-coding downstream 107307 301793 ~ 302070 (+)
G456725 NA non-coding downstream 111480 305966 ~ 306223 (+)
G456730 NA non-coding downstream 120911 315397 ~ 315865 (+)
G456774 NA other downstream 231597 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 623978 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3594832 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3812140 4013468 ~ 4015412 (+)
G459303 NA other downstream 4290911 4485397 ~ 4488552 (+)

Expression


Co-expression Network