G456725


Basic Information

Item Value
gene id G456725
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 305966 ~ 306223 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524282
TAGCTCCATTCCTCTGTTATGCTACGGTTTCTTTCACTTCCACCTTATCATTTCCTATGTATGCGTGATTTGTGTGTACTGTATGTGTCTGTTAGAGTAGTTATGGGTTTGTGATTTAGTTAAATAAAACTTTTGTGCACATTCTTGTGAGTTGATTCTGATCTGCTTATAAACCAATGTCAATTTAGCAATTATGATCACAACTACATGCTAAGAAAGCATTATTTTTCTGTGGCCATGGAAAATATCCTTTCTGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524282 True 258 lncRNA 0.34 1 305966 306223

Neighbor

gene id symbol gene type direction distance location
CI01000321_00283589_00284224 NA coding upstream 21629 283324 ~ 284337 (+)
CI01000321_00150756_00152124 NA coding upstream 153777 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 205380 98296 ~ 100586 (+)
CI01000321_00326486_00355049 NA coding downstream 20170 326393 ~ 355202 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 135159 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 204331 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 242872 549095 ~ 550648 (+)
CI01000321_00559268_00567811 NA coding downstream 253045 559268 ~ 568138 (+)
G456711 NA non-coding upstream 3896 301793 ~ 302070 (+)
G456691 NA non-coding upstream 42131 263583 ~ 263835 (+)
G456689 NA non-coding upstream 42713 262882 ~ 263253 (+)
G456589 NA non-coding upstream 111480 194227 ~ 194486 (+)
G456588 NA non-coding upstream 119624 185632 ~ 186342 (+)
G456730 NA non-coding downstream 9174 315397 ~ 315865 (+)
G456751 NA non-coding downstream 19202 325425 ~ 325637 (+)
G456759 NA non-coding downstream 28045 334268 ~ 334476 (+)
G456760 NA non-coding downstream 28560 334783 ~ 334993 (+)
G456763 NA non-coding downstream 32052 338275 ~ 338501 (+)
G456774 NA other downstream 119860 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 512241 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3483095 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3700403 4013468 ~ 4015412 (+)
G459303 NA other downstream 4179174 4485397 ~ 4488552 (+)

Expression


Co-expression Network