G456760


Basic Information

Item Value
gene id G456760
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 334783 ~ 334993 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524322
CTTGGGCCCAGTTTCACAGAGAGGGCTTAGCCTAAGCCAAGATTAGACCTTAGTTCAATTAGGATATTTAAGTAGCTTTTATAAACATACACTAGAAAAAAACATTACTGGTGTGCATCTTGAGACAAAACAATGGCTCTGACATATTTTAAGATCTGTCAGTACAAGTTACTTTCAGTTAAAACCGCTCAAACATGCATTTTAGTCTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524322 True 211 lncRNA 0.36 1 334783 334993

Neighbor

gene id symbol gene type direction distance location
CI01000321_00283589_00284224 NA coding upstream 50446 283324 ~ 284337 (+)
CI01000321_00150756_00152124 NA coding upstream 182594 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 234197 98296 ~ 100586 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 106389 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 175561 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 214102 549095 ~ 550648 (+)
CI01000321_00559268_00567811 NA coding downstream 224275 559268 ~ 568138 (+)
CI01000321_00649226_00658653 NA coding downstream 314233 649226 ~ 658950 (+)
G456759 NA non-coding upstream 307 334268 ~ 334476 (+)
G456751 NA non-coding upstream 9146 325425 ~ 325637 (+)
G456730 NA non-coding upstream 18918 315397 ~ 315865 (+)
G456725 NA non-coding upstream 28560 305966 ~ 306223 (+)
G456711 NA non-coding upstream 32713 301793 ~ 302070 (+)
G456763 NA non-coding downstream 3282 338275 ~ 338501 (+)
G456780 NA non-coding downstream 57199 392192 ~ 392416 (+)
G456782 NA non-coding downstream 61049 396042 ~ 396304 (+)
G456775 NA non-coding downstream 68379 403372 ~ 403765 (+)
G456791 NA non-coding downstream 150563 485556 ~ 485862 (+)
G456774 NA other downstream 91090 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 483471 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3454325 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3671633 4013468 ~ 4015412 (+)
G459303 NA other downstream 4150404 4485397 ~ 4488552 (+)

Expression


Co-expression Network