G456780


Basic Information

Item Value
gene id G456780
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 392192 ~ 392416 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524342
ATCCGCATATTAGAATGATTGCTAAAGGATCATGTGACACTGAAGACTGGAGTAATGATGCTGAAAATTCAGCTTTGCATCACAGAAATAAATTATATTGTAAAGTATATTAAAATAGAAAACCATAATTTCAAATTGTAATAATATTTCACAATATTATTGTTTTTTCTGTATTTATTATGAAATAAATGCAGCCTTAATGAGCATAAGAGACTTCGTTCAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524342 True 225 lncRNA 0.27 1 392192 392416

Neighbor

gene id symbol gene type direction distance location
CI01000321_00326486_00355049 NA coding upstream 36990 326393 ~ 355202 (+)
CI01000321_00283589_00284224 NA coding upstream 107855 283324 ~ 284337 (+)
CI01000321_00150756_00152124 NA coding upstream 240003 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 291606 98296 ~ 100586 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding downstream 48966 441382 ~ 448780 (+)
CI01000321_00511077_00516356 NA coding downstream 118138 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 156679 549095 ~ 550648 (+)
CI01000321_00559268_00567811 NA coding downstream 166852 559268 ~ 568138 (+)
CI01000321_00649226_00658653 NA coding downstream 256810 649226 ~ 658950 (+)
G456763 NA non-coding upstream 53691 338275 ~ 338501 (+)
G456760 NA non-coding upstream 57199 334783 ~ 334993 (+)
G456759 NA non-coding upstream 57716 334268 ~ 334476 (+)
G456751 NA non-coding upstream 66555 325425 ~ 325637 (+)
G456730 NA non-coding upstream 76327 315397 ~ 315865 (+)
G456782 NA non-coding downstream 3626 396042 ~ 396304 (+)
G456775 NA non-coding downstream 10956 403372 ~ 403765 (+)
G456791 NA non-coding downstream 93140 485556 ~ 485862 (+)
G456793 NA non-coding downstream 94387 486803 ~ 487488 (+)
G456795 NA non-coding downstream 95541 487957 ~ 488309 (+)
G456774 NA other downstream 33667 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 426048 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3396902 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3614210 4013468 ~ 4015412 (+)
G459303 NA other downstream 4092981 4485397 ~ 4488552 (+)

Expression


Co-expression Network