G456791


Basic Information

Item Value
gene id G456791
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 485556 ~ 485862 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524353
ATAATTAGGACCCTGAAGTTCCCTGTAGGTTGGCTAGTATGATTTTTAGAGAGAAAGAAATACCATTTGGGTCTTCTTAGGTGAGAGTGTTGGTTTTTGCTTATTGTATGTTCTCTGGTGAGACCACACTCCTTTGTTTTTCTCTTTATTGGTGAGTAAGCTGGCCTCCTCCCACTTGAGAGTGGTTTTGAGGCCGCTGCTCTGTTGCAGGCTGGCCCTCTTCAGGCCGCCTTGATAGCCACCTCAGGGTAGAGTAGTTTGCCTCCTCTCCTATAGGTTTGGAGGGCTGCTTTTGCAAAGAGACAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524353 True 307 lncRNA 0.47 1 485556 485862

Neighbor

gene id symbol gene type direction distance location
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding upstream 36776 441382 ~ 448780 (+)
CI01000321_00326486_00355049 NA coding upstream 130354 326393 ~ 355202 (+)
CI01000321_00283589_00284224 NA coding upstream 201219 283324 ~ 284337 (+)
CI01000321_00150756_00152124 NA coding upstream 333367 150756 ~ 152189 (+)
CI01000321_00098493_00100489 NA coding upstream 384970 98296 ~ 100586 (+)
CI01000321_00511077_00516356 NA coding downstream 24692 510554 ~ 516356 (+)
CI01000321_00549095_00550611 NA coding downstream 63233 549095 ~ 550648 (+)
CI01000321_00559268_00567811 NA coding downstream 73406 559268 ~ 568138 (+)
CI01000321_00649226_00658653 NA coding downstream 163364 649226 ~ 658950 (+)
CI01000321_00697882_00700283 CCK coding downstream 211204 697066 ~ 700313 (+)
G456775 NA non-coding upstream 81791 403372 ~ 403765 (+)
G456782 NA non-coding upstream 89252 396042 ~ 396304 (+)
G456780 NA non-coding upstream 93140 392192 ~ 392416 (+)
G456763 NA non-coding upstream 147055 338275 ~ 338501 (+)
G456760 NA non-coding upstream 150563 334783 ~ 334993 (+)
G456793 NA non-coding downstream 941 486803 ~ 487488 (+)
G456795 NA non-coding downstream 2095 487957 ~ 488309 (+)
G456798 NA non-coding downstream 7478 493340 ~ 493807 (+)
G456800 NA non-coding downstream 9373 495235 ~ 495481 (+)
G456805 NA non-coding downstream 48568 534430 ~ 539694 (+)
G456774 NA other upstream 58531 426083 ~ 427025 (+)
CI01000321_00815160_00819665 NA other downstream 332602 815160 ~ 819749 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3303456 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3520764 4013468 ~ 4015412 (+)
G459303 NA other downstream 3999535 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 4029672 4515534 ~ 4518187 (+)

Expression


Co-expression Network