G456842


Basic Information

Item Value
gene id G456842
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 632724 ~ 633919 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524408
GTCTGCGCGGGACTGTTTTTTTCGTCCCGCTCCCGCAATGGTTCTATTCCGCACGCACCCGCTCCCGCCTAAAATTCACTCTGTGTTCACCCGCTATCCGCATATAGTGATTTTCTTCCCGACCCGACGGGTCCCGCTAAAGATCGTTTCCAGAATCTCGCATTTAAACTTCCCCTAAAGAAAGAGAGTGATTGGGGATAACAAATATAAAATGTTGCATATACAAGATTTGTATTTGTTATTTGTCTATGATGCTGTCAACACCCTAAAAAATGTCAGAGAAAAAATGTCACAAAGAATAATAGGCTAAATATCACAG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524408 True 319 lncRNA 0.43 2 632724 633919

Neighbor

gene id symbol gene type direction distance location
CI01000321_00559268_00567811 NA coding upstream 64586 559268 ~ 568138 (+)
CI01000321_00549095_00550611 NA coding upstream 82076 549095 ~ 550648 (+)
CI01000321_00511077_00516356 NA coding upstream 116368 510554 ~ 516356 (+)
CI01000321_00441382_00448773 RPS18.L, GM10260, RPS18, RPS18-PS3, GM6630, BRAFLDRAFT_114927, GM11361, RPS18P5 coding upstream 183944 441382 ~ 448780 (+)
CI01000321_00326486_00355049 NA coding upstream 277522 326393 ~ 355202 (+)
CI01000321_00649226_00658653 NA coding downstream 15307 649226 ~ 658950 (+)
CI01000321_00697882_00700283 CCK coding downstream 63147 697066 ~ 700313 (+)
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding downstream 151949 785868 ~ 791009 (+)
CI01000321_00815160_00819665 NA coding downstream 181241 815160 ~ 819749 (+)
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding downstream 210375 844294 ~ 879693 (+)
G456806 NA non-coding upstream 87613 544844 ~ 545111 (+)
G456805 NA non-coding upstream 93030 534430 ~ 539694 (+)
G456800 NA non-coding upstream 137243 495235 ~ 495481 (+)
G456798 NA non-coding upstream 138917 493340 ~ 493807 (+)
G456795 NA non-coding upstream 144415 487957 ~ 488309 (+)
G456867 NA non-coding downstream 82780 716699 ~ 718214 (+)
G456868 NA non-coding downstream 101268 735187 ~ 736481 (+)
G456911 NA non-coding downstream 167741 801660 ~ 801879 (+)
G456912 NA non-coding downstream 168241 802160 ~ 802388 (+)
G456892 NA non-coding downstream 246306 880225 ~ 882441 (+)
G456774 NA other upstream 205699 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3155399 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3372707 4013468 ~ 4015412 (+)
G459303 NA other downstream 3851478 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3881615 4515534 ~ 4518187 (+)

Expression


Co-expression Network