G456867



Basic Information


Item Value
gene id G456867
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 716699 ~ 718214 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>TU524437
CTGCAGGTCCACAATCTGAGAGAGTAAGTGTGTGATTTCCTCCTGTTGGCGAGAGGCATCTTCTGTCTTTCTGGCCAGCTCTTCAGCTATACTTGAGATCTGGATGCTGGACTGCCTTAGCTCTCTGACGCAGTCATTCACCAGCTGCTGTTCTTTCTCCTCATATGACTCTGTCTCAGATTTCAGATGACTCGCCTCTGATCTGAGAGAAAGATTTTCCTCCTCAAGGTCTCGAAGTTTTTGCTGCAGAATATCCAGAGATGAACCGCTACAAGCAGAAACTCCTGCCCTTCCCTGTTGACCCGTGGGCGATCCAGACCCCTCT

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU524437 True 325 lncRNA 0.50 4 716699 718214

Neighbor


gene id symbol gene type direction distance location
CI01000321_00697882_00700283 CCK coding upstream 16386 697066 ~ 700313 (+)
CI01000321_00649226_00658653 NA coding upstream 57749 649226 ~ 658950 (+)
CI01000321_00559268_00567811 NA coding upstream 148561 559268 ~ 568138 (+)
CI01000321_00549095_00550611 NA coding upstream 166051 549095 ~ 550648 (+)
CI01000321_00511077_00516356 NA coding upstream 200343 510554 ~ 516356 (+)
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding downstream 67654 785868 ~ 791009 (+)
CI01000321_00815160_00819665 NA coding downstream 96946 815160 ~ 819749 (+)
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding downstream 126080 844294 ~ 879693 (+)
CI01000321_00887320_00899893 MRPL3 coding downstream 169106 887320 ~ 900122 (+)
CI01000321_00909867_00919491 NA coding downstream 191224 909438 ~ 920478 (+)
G456842 NA non-coding upstream 82780 632724 ~ 633919 (+)
G456806 NA non-coding upstream 171588 544844 ~ 545111 (+)
G456805 NA non-coding upstream 177005 534430 ~ 539694 (+)
G456800 NA non-coding upstream 221218 495235 ~ 495481 (+)
G456798 NA non-coding upstream 222892 493340 ~ 493807 (+)
G456868 NA non-coding downstream 16973 735187 ~ 736481 (+)
G456911 NA non-coding downstream 83446 801660 ~ 801879 (+)
G456912 NA non-coding downstream 83946 802160 ~ 802388 (+)
G456892 NA non-coding downstream 162011 880225 ~ 882441 (+)
G456926 NA non-coding downstream 165169 883383 ~ 883820 (+)
G456774 NA other upstream 289674 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 3071104 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3288412 4013468 ~ 4015412 (+)
G459303 NA other downstream 3767183 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3797320 4515534 ~ 4518187 (+)

Expression



Co-expression Network