G456911


Basic Information

Item Value
gene id G456911
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 801660 ~ 801879 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524490
GTCACTTTCAGTTATTTTAGCTGTACAAAAGAAGTCTGTTATGCTGCTTTATATTGCAAACTGGTATTAGTTATCATATTTTAATTTATTATCATAATCATAAAAACACTAGTTTGTAGCACAAATACTTTTACCTTTTACTGCACTTTGTTATTCTTCTAGTTATTTACCTATAGAGGCAAATGAATTGGAAGTCTTACACATTCAAAGAAAATAGCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524490 True 220 lncRNA 0.28 1 801660 801879

Neighbor

gene id symbol gene type direction distance location
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding upstream 10651 785868 ~ 791009 (+)
CI01000321_00697882_00700283 CCK coding upstream 101347 697066 ~ 700313 (+)
CI01000321_00649226_00658653 NA coding upstream 142710 649226 ~ 658950 (+)
CI01000321_00559268_00567811 NA coding upstream 233522 559268 ~ 568138 (+)
CI01000321_00549095_00550611 NA coding upstream 251012 549095 ~ 550648 (+)
CI01000321_00815160_00819665 NA coding downstream 13281 815160 ~ 819749 (+)
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding downstream 42415 844294 ~ 879693 (+)
CI01000321_00887320_00899893 MRPL3 coding downstream 85441 887320 ~ 900122 (+)
CI01000321_00909867_00919491 NA coding downstream 107559 909438 ~ 920478 (+)
CI01000321_00981761_00983302 NA coding downstream 179622 981501 ~ 983955 (+)
G456868 NA non-coding upstream 65179 735187 ~ 736481 (+)
G456867 NA non-coding upstream 83446 716699 ~ 718214 (+)
G456842 NA non-coding upstream 167741 632724 ~ 633919 (+)
G456806 NA non-coding upstream 256549 544844 ~ 545111 (+)
G456805 NA non-coding upstream 261966 534430 ~ 539694 (+)
G456912 NA non-coding downstream 281 802160 ~ 802388 (+)
G456892 NA non-coding downstream 78346 880225 ~ 882441 (+)
G456926 NA non-coding downstream 81504 883383 ~ 883820 (+)
G456928 NA non-coding downstream 83612 885491 ~ 885815 (+)
G456929 NA non-coding downstream 84596 886475 ~ 886724 (+)
G456774 NA other upstream 374635 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2987439 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3204747 4013468 ~ 4015412 (+)
G459303 NA other downstream 3683518 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3713655 4515534 ~ 4518187 (+)

Expression


Co-expression Network