G456912


Basic Information

Item Value
gene id G456912
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 802160 ~ 802388 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524491
GGAAAAATCTGAACTCAATTTCAGTTGATACTCTTTCTTTCTCCCAGTGTCTCTTAATCTCTCTGAGCTTTGGGCTGTAATTATCTGTTAAGTAAACTCTTTGTTGCACTGAAATGAGAGAAAAAATTGGGGCAAGTTGCAGTTAGACAACTGAAGGGGTCCTCAGAGAAGTGAGACTAGAATATCACCTGTCTTTGGTGCACAGTAGCACAAAGAGGATTTTTCCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524491 True 229 lncRNA 0.40 1 802160 802388

Neighbor

gene id symbol gene type direction distance location
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding upstream 11151 785868 ~ 791009 (+)
CI01000321_00697882_00700283 CCK coding upstream 101847 697066 ~ 700313 (+)
CI01000321_00649226_00658653 NA coding upstream 143210 649226 ~ 658950 (+)
CI01000321_00559268_00567811 NA coding upstream 234022 559268 ~ 568138 (+)
CI01000321_00549095_00550611 NA coding upstream 251512 549095 ~ 550648 (+)
CI01000321_00815160_00819665 NA coding downstream 12772 815160 ~ 819749 (+)
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding downstream 41906 844294 ~ 879693 (+)
CI01000321_00887320_00899893 MRPL3 coding downstream 84932 887320 ~ 900122 (+)
CI01000321_00909867_00919491 NA coding downstream 107050 909438 ~ 920478 (+)
CI01000321_00981761_00983302 NA coding downstream 179113 981501 ~ 983955 (+)
G456911 NA non-coding upstream 281 801660 ~ 801879 (+)
G456868 NA non-coding upstream 65679 735187 ~ 736481 (+)
G456867 NA non-coding upstream 83946 716699 ~ 718214 (+)
G456842 NA non-coding upstream 168241 632724 ~ 633919 (+)
G456806 NA non-coding upstream 257049 544844 ~ 545111 (+)
G456892 NA non-coding downstream 77837 880225 ~ 882441 (+)
G456926 NA non-coding downstream 80995 883383 ~ 883820 (+)
G456928 NA non-coding downstream 83103 885491 ~ 885815 (+)
G456929 NA non-coding downstream 84087 886475 ~ 886724 (+)
G456930 NA non-coding downstream 100974 903362 ~ 903598 (+)
G456774 NA other upstream 375135 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2986930 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3204238 4013468 ~ 4015412 (+)
G459303 NA other downstream 3683009 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3713146 4515534 ~ 4518187 (+)

Expression


Co-expression Network