G456928


Basic Information

Item Value
gene id G456928
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 885491 ~ 885815 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524507
CTGATGTCTGGAAGGAAACTGCTGCTGCAATATGTACATACTTAATGCTCCTCAGAGCCCTGAATGTGAACATCAGTGGCAGCGGGCTGGACTGAGGACGCAGCCGTGAGTGGATGAGGCTGGTAGCAGGGTGGTTGAGGAAAGTGCATGGTAGGTTGGAGGAAAACATAACTGGCAGGTTGGAGGAAGAAGCAGCTGGCATGGTGAATGAGGTAGCTGGCAGCATGAATGAAGTAGCAGCTGGCGGGACAGAGAAGCAGCTGAGTTTCAATCTGCAACGGTGCTGAGGTTTCAAGGAAAACCCATGGCAGACGAGAGCATGAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524507 True 325 lncRNA 0.53 1 885491 885815

Neighbor

gene id symbol gene type direction distance location
CI01000321_00844476_00879488 CPNE4A, CPNE4B, CPNE4 coding upstream 5798 844294 ~ 879693 (+)
CI01000321_00815160_00819665 NA coding upstream 65742 815160 ~ 819749 (+)
CI01000321_00785868_00790038 CTNNB1, CTNNB2 coding upstream 94482 785868 ~ 791009 (+)
CI01000321_00697882_00700283 CCK coding upstream 185178 697066 ~ 700313 (+)
CI01000321_00649226_00658653 NA coding upstream 226541 649226 ~ 658950 (+)
CI01000321_00887320_00899893 MRPL3 coding downstream 1505 887320 ~ 900122 (+)
CI01000321_00909867_00919491 NA coding downstream 23623 909438 ~ 920478 (+)
CI01000321_00981761_00983302 NA coding downstream 95686 981501 ~ 983955 (+)
CI01000321_00986344_00991651 NA coding downstream 100529 986344 ~ 992510 (+)
CI01000321_00994911_00997021 ASTE1 coding downstream 109096 994911 ~ 997093 (+)
G456926 NA non-coding upstream 1671 883383 ~ 883820 (+)
G456892 NA non-coding upstream 3050 880225 ~ 882441 (+)
G456912 NA non-coding upstream 83103 802160 ~ 802388 (+)
G456911 NA non-coding upstream 83612 801660 ~ 801879 (+)
G456868 NA non-coding upstream 149010 735187 ~ 736481 (+)
G456929 NA non-coding downstream 660 886475 ~ 886724 (+)
G456930 NA non-coding downstream 17547 903362 ~ 903598 (+)
G456931 NA non-coding downstream 21351 907166 ~ 907405 (+)
G456953 NA non-coding downstream 130513 1016328 ~ 1016631 (+)
G456976 NA non-coding downstream 210812 1096627 ~ 1099111 (+)
G456774 NA other upstream 458466 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2903503 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 3120811 4013468 ~ 4015412 (+)
G459303 NA other downstream 3599582 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3629719 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 3861597 4747650 ~ 4749579 (+)

Expression


Co-expression Network