Gene
RNA
| Item | Value |
|---|---|
| gene id | G456977 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 1099692 ~ 1160094 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU524561 | True | 604 | lncRNA | 0.36 | 2 | 1099692 | 1160094 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_01065033_01086306 | JAZF1, JAZF1A | coding | upstream | 11869 | 1065033 ~ 1087823 (+) |
| CI01000321_01010375_01014716 | NA | coding | upstream | 84966 | 1010375 ~ 1014726 (+) |
| CI01000321_00994911_00997021 | ASTE1 | coding | upstream | 102599 | 994911 ~ 997093 (+) |
| CI01000321_00986344_00991651 | NA | coding | upstream | 107182 | 986344 ~ 992510 (+) |
| CI01000321_00981761_00983302 | NA | coding | upstream | 115737 | 981501 ~ 983955 (+) |
| CI01000321_01185036_01186172 | HOXA13A, HOXA13 | coding | downstream | 22430 | 1182524 ~ 1186752 (+) |
| CI01000321_01192831_01199203 | HOXA11A | coding | downstream | 29368 | 1189462 ~ 1200188 (+) |
| CI01000321_01203252_01204312 | NA | coding | downstream | 42630 | 1202724 ~ 1205036 (+) |
| CI01000321_01208375_01208619 | NA | coding | downstream | 46681 | 1206775 ~ 1208658 (+) |
| CI01000321_01213692_01214996 | HOXA5A | coding | downstream | 53467 | 1213561 ~ 1215256 (+) |
| G456976 | NA | non-coding | upstream | 581 | 1096627 ~ 1099111 (+) |
| G456978 | NA | non-coding | upstream | 1982 | 1097074 ~ 1097710 (+) |
| G456953 | NA | non-coding | upstream | 83061 | 1016328 ~ 1016631 (+) |
| G456931 | NA | non-coding | upstream | 192287 | 907166 ~ 907405 (+) |
| G456930 | NA | non-coding | upstream | 196094 | 903362 ~ 903598 (+) |
| G457018 | NA | non-coding | downstream | 700 | 1160794 ~ 1161141 (+) |
| G457019 | NA | non-coding | downstream | 6221 | 1166315 ~ 1166550 (+) |
| G457012 | NA | non-coding | downstream | 10924 | 1171018 ~ 1171259 (+) |
| G457022 | NA | non-coding | downstream | 18473 | 1178567 ~ 1179117 (+) |
| G457025 | NA | non-coding | downstream | 85205 | 1245299 ~ 1245636 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 276845 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 672667 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 2629224 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 2846532 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 3325303 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 3355440 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 3587318 | 4747650 ~ 4749579 (+) |
