G457019


Basic Information

Item Value
gene id G457019
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 1166315 ~ 1166550 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524620
GAAATGTCTCGTTCACACAGCAACTTACAGTAGCGTCTGGAACACTGCCTGTATGAACGTGCAATGAGTTGTCAAGCCTGTATTCTCTTACTAGTAACCATAACAACAGTTACCAACGTAATATTAAAGATGGCGACGCCCATAAAACTGAAAAGTATTATCACTTTTGACATGACAAGAGACTAATTGAACCATGAGTTCATCCATCAAAACTTCATTAACCAACAGCAGCATGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524620 True 236 lncRNA 0.39 1 1166315 1166550

Neighbor

gene id symbol gene type direction distance location
CI01000321_01122567_01145051 HIBADH, HIBADHB, HIBADHA, HIBADH.S coding upstream 21264 1122567 ~ 1145051 (+)
CI01000321_01065033_01086306 JAZF1, JAZF1A coding upstream 78492 1065033 ~ 1087823 (+)
CI01000321_01010375_01014716 NA coding upstream 151589 1010375 ~ 1014726 (+)
CI01000321_00994911_00997021 ASTE1 coding upstream 169222 994911 ~ 997093 (+)
CI01000321_00986344_00991651 NA coding upstream 173805 986344 ~ 992510 (+)
CI01000321_01185036_01186172 HOXA13A, HOXA13 coding downstream 15974 1182524 ~ 1186752 (+)
CI01000321_01192831_01199203 HOXA11A coding downstream 22912 1189462 ~ 1200188 (+)
CI01000321_01203252_01204312 NA coding downstream 36174 1202724 ~ 1205036 (+)
CI01000321_01208375_01208619 NA coding downstream 40225 1206775 ~ 1208658 (+)
CI01000321_01213692_01214996 HOXA5A coding downstream 47011 1213561 ~ 1215256 (+)
G457018 NA non-coding upstream 5174 1160794 ~ 1161141 (+)
G456977 NA non-coding upstream 6221 1099692 ~ 1160094 (+)
G456973 NA non-coding upstream 51002 1105225 ~ 1115313 (+)
G456976 NA non-coding upstream 67204 1096627 ~ 1099111 (+)
G456978 NA non-coding upstream 68605 1097074 ~ 1097710 (+)
G457012 NA non-coding downstream 4468 1171018 ~ 1171259 (+)
G457022 NA non-coding downstream 12017 1178567 ~ 1179117 (+)
G457025 NA non-coding downstream 78749 1245299 ~ 1245636 (+)
G457033 NA non-coding downstream 98993 1265543 ~ 1265757 (+)
G457034 NA non-coding downstream 99912 1266462 ~ 1266665 (+)
CI01000321_00815160_00819665 NA other upstream 343468 815160 ~ 819749 (+)
G456774 NA other upstream 739290 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2622768 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 2840076 4013468 ~ 4015412 (+)
G459303 NA other downstream 3318847 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3348984 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 3580862 4747650 ~ 4749579 (+)

Expression


Co-expression Network