G457022


Basic Information

Item Value
gene id G457022
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000321
NCBI id null
chromosome length 5206101
location 1178567 ~ 1179117 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU524623
TGCCCAAATGTTTTTTATTAAAATACATTATTTCACTTTAATTAAATTAATTAAAATAATTCACGAGTTTATTAAAATACCCAGAGAGTAGACCTAATGACAATATAACAGGTTAAGAGGTGGTTACTAGAGTATTTTATGAAGTTTGCAATGTTTTGCGTTTCAAAGGCTTTGTTGACAACAGTGATTATTGTCTTAGTGATTATTATCTTGTATGCAGTTCAACGCTTCCGTCTTCTCATTTCTCATCAGTATTCTTCCACGTTCTCTCCTCCTCGTATGGGAAATCCGGGGATGTTTTACAAGCACTTGGACACAACCGCCTTGAGTGGATGGGACGCTCATGTAGTGGAGTGACGTCAGACGCTCTATTTGTGTGCCCGCGGCGACAGTTCTCTGAATCATCAAAGCTGTCCTCGTGCGCCCTCGCCTGTTAGGAAAGATAAGAGCACTGCAGAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAGTTTTAGTGTTCTTTATTGACAAGGAAAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU524623 True 551 lncRNA 0.40 1 1178567 1179117

Neighbor

gene id symbol gene type direction distance location
CI01000321_01122567_01145051 HIBADH, HIBADHB, HIBADHA, HIBADH.S coding upstream 33516 1122567 ~ 1145051 (+)
CI01000321_01065033_01086306 JAZF1, JAZF1A coding upstream 90744 1065033 ~ 1087823 (+)
CI01000321_01010375_01014716 NA coding upstream 163841 1010375 ~ 1014726 (+)
CI01000321_00994911_00997021 ASTE1 coding upstream 181474 994911 ~ 997093 (+)
CI01000321_00986344_00991651 NA coding upstream 186057 986344 ~ 992510 (+)
CI01000321_01185036_01186172 HOXA13A, HOXA13 coding downstream 3407 1182524 ~ 1186752 (+)
CI01000321_01192831_01199203 HOXA11A coding downstream 10345 1189462 ~ 1200188 (+)
CI01000321_01203252_01204312 NA coding downstream 23607 1202724 ~ 1205036 (+)
CI01000321_01208375_01208619 NA coding downstream 27658 1206775 ~ 1208658 (+)
CI01000321_01213692_01214996 HOXA5A coding downstream 34444 1213561 ~ 1215256 (+)
G457012 NA non-coding upstream 7308 1171018 ~ 1171259 (+)
G457019 NA non-coding upstream 12017 1166315 ~ 1166550 (+)
G457018 NA non-coding upstream 17426 1160794 ~ 1161141 (+)
G456977 NA non-coding upstream 18473 1099692 ~ 1160094 (+)
G456973 NA non-coding upstream 63254 1105225 ~ 1115313 (+)
G457025 NA non-coding downstream 66182 1245299 ~ 1245636 (+)
G457033 NA non-coding downstream 86426 1265543 ~ 1265757 (+)
G457034 NA non-coding downstream 87345 1266462 ~ 1266665 (+)
G457001 NA non-coding downstream 105251 1284368 ~ 1293217 (+)
G457000 NA non-coding downstream 116349 1295466 ~ 1299847 (+)
CI01000321_00815160_00819665 NA other upstream 355720 815160 ~ 819749 (+)
G456774 NA other upstream 751542 426083 ~ 427025 (+)
CI01000321_03795430_03804685 SHISA7B, SHISA7 other downstream 2610201 3792915 ~ 3805511 (+)
CI01000321_04013470_04014515 CACNG8 other downstream 2827509 4013468 ~ 4015412 (+)
G459303 NA other downstream 3306280 4485397 ~ 4488552 (+)
CI01000321_04515562_04517953 MRPS21 other downstream 3336417 4515534 ~ 4518187 (+)
CI01000321_04748037_04748315 DPM3 other downstream 3568295 4747650 ~ 4749579 (+)

Expression


Co-expression Network