Gene
RNA
| Item | Value |
|---|---|
| gene id | G457104 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 1386549 ~ 1386987 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU524721 | True | 439 | lncRNA | 0.40 | 1 | 1386549 | 1386987 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_01362387_01381302 | OSBPL3, OSBPL3A | coding | upstream | 3892 | 1362387 ~ 1382657 (+) |
| CI01000321_01348009_01350252 | NA | coding | upstream | 34775 | 1348009 ~ 1351774 (+) |
| CI01000321_01342947_01344272 | NPVF | coding | upstream | 41938 | 1342900 ~ 1344611 (+) |
| CI01000321_01242644_01243808 | HOXA1A, HOXA1 | coding | upstream | 142136 | 1241961 ~ 1244413 (+) |
| CI01000321_01238511_01240051 | NA | coding | upstream | 146223 | 1238374 ~ 1240326 (+) |
| CI01000321_01411682_01416499 | NA | coding | downstream | 24695 | 1411682 ~ 1416536 (+) |
| CI01000321_01473475_01476619 | CCDC126 | coding | downstream | 86488 | 1473475 ~ 1477216 (+) |
| CI01000321_01477590_01479280 | NA | coding | downstream | 90603 | 1477590 ~ 1479280 (+) |
| CI01000321_01480684_01483493 | NA | coding | downstream | 93697 | 1480684 ~ 1483792 (+) |
| CI01000321_01491101_01521160 | IGF2BP3 | coding | downstream | 103906 | 1490893 ~ 1521421 (+) |
| G457000 | NA | non-coding | upstream | 86702 | 1295466 ~ 1299847 (+) |
| G457001 | NA | non-coding | upstream | 93332 | 1284368 ~ 1293217 (+) |
| G457034 | NA | non-coding | upstream | 119884 | 1266462 ~ 1266665 (+) |
| G457033 | NA | non-coding | upstream | 120792 | 1265543 ~ 1265757 (+) |
| G457025 | NA | non-coding | upstream | 140913 | 1245299 ~ 1245636 (+) |
| G457106 | NA | non-coding | downstream | 1366 | 1388353 ~ 1388687 (+) |
| G457107 | NA | non-coding | downstream | 1745 | 1388732 ~ 1389229 (+) |
| G457108 | NA | non-coding | downstream | 2604 | 1389591 ~ 1390054 (+) |
| G457109 | NA | non-coding | downstream | 3931 | 1390918 ~ 1391184 (+) |
| G457112 | NA | non-coding | downstream | 6554 | 1393541 ~ 1393741 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 563702 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 959524 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 2402331 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 2619639 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 3098410 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 3128547 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 3360425 | 4747650 ~ 4749579 (+) |
