Gene
RNA
| Item | Value |
|---|---|
| gene id | G457121 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000321 |
| NCBI id | null |
| chromosome length | 5206101 |
| location | 1430229 ~ 1431421 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU524740 | True | 331 | lncRNA | 0.40 | 2 | 1430229 | 1431421 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000321_01411682_01416499 | NA | coding | upstream | 13693 | 1411682 ~ 1416536 (+) |
| CI01000321_01362387_01381302 | OSBPL3, OSBPL3A | coding | upstream | 47572 | 1362387 ~ 1382657 (+) |
| CI01000321_01348009_01350252 | NA | coding | upstream | 78455 | 1348009 ~ 1351774 (+) |
| CI01000321_01342947_01344272 | NPVF | coding | upstream | 85618 | 1342900 ~ 1344611 (+) |
| CI01000321_01242644_01243808 | HOXA1A, HOXA1 | coding | upstream | 185816 | 1241961 ~ 1244413 (+) |
| CI01000321_01473475_01476619 | CCDC126 | coding | downstream | 42054 | 1473475 ~ 1477216 (+) |
| CI01000321_01477590_01479280 | NA | coding | downstream | 46169 | 1477590 ~ 1479280 (+) |
| CI01000321_01480684_01483493 | NA | coding | downstream | 49263 | 1480684 ~ 1483792 (+) |
| CI01000321_01491101_01521160 | IGF2BP3 | coding | downstream | 59472 | 1490893 ~ 1521421 (+) |
| CI01000321_01540466_01544669 | NA | coding | downstream | 109045 | 1540466 ~ 1545019 (+) |
| G457090 | NA | non-coding | upstream | 12119 | 1394386 ~ 1418110 (+) |
| G457112 | NA | non-coding | upstream | 36488 | 1393541 ~ 1393741 (+) |
| G457109 | NA | non-coding | upstream | 39045 | 1390918 ~ 1391184 (+) |
| G457108 | NA | non-coding | upstream | 40175 | 1389591 ~ 1390054 (+) |
| G457107 | NA | non-coding | upstream | 41000 | 1388732 ~ 1389229 (+) |
| G457133 | NA | non-coding | downstream | 19856 | 1451277 ~ 1453283 (+) |
| G457139 | NA | non-coding | downstream | 37922 | 1469343 ~ 1469544 (+) |
| G457100 | NA | non-coding | downstream | 53704 | 1485125 ~ 1486634 (+) |
| G457160 | NA | non-coding | downstream | 187482 | 1618903 ~ 1619330 (+) |
| G457183 | NA | non-coding | downstream | 379996 | 1811417 ~ 1811668 (+) |
| CI01000321_00815160_00819665 | NA | other | upstream | 607382 | 815160 ~ 819749 (+) |
| G456774 | NA | other | upstream | 1003204 | 426083 ~ 427025 (+) |
| CI01000321_03795430_03804685 | SHISA7B, SHISA7 | other | downstream | 2357897 | 3792915 ~ 3805511 (+) |
| CI01000321_04013470_04014515 | CACNG8 | other | downstream | 2575205 | 4013468 ~ 4015412 (+) |
| G459303 | NA | other | downstream | 3053976 | 4485397 ~ 4488552 (+) |
| CI01000321_04515562_04517953 | MRPS21 | other | downstream | 3084113 | 4515534 ~ 4518187 (+) |
| CI01000321_04748037_04748315 | DPM3 | other | downstream | 3315991 | 4747650 ~ 4749579 (+) |
